Halomonas campaniensis: FF32_04500
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Entry
FF32_04500 CDS
T03198
Name
(GenBank) hypothetical protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
hcs
Halomonas campaniensis
Brite
KEGG Orthology (KO) [BR:
hcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcs03000
]
FF32_04500
Transcription factors [BR:
hcs03000
]
Prokaryotic type
Helix-turn-helix
Other families
FF32_04500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
HTH_8
Sigma54_activ_2
AAA_5
AAA_lid_14
HTH_23
HTH_30
AAA_3
HTH_28
TIP49
HTH_7
HTH_1
AAA_2
AAA_16
HTH_22
AAA
HTH_50
Diguanyl_cycl_sensor
Xre-like-HTH
HTH_29
TsaE
AAA_7
PAS_2
PgaA_barrel
Motif
Other DBs
NCBI-ProteinID:
AIA74125
LinkDB
All DBs
Position
complement(1026908..1028857)
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AA seq
649 aa
AA seq
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MISKTVLRTPDVILQAREHLLRGQQLPMGMLDASIDRSWQRCIEHGLQLGSLPELPRLDS
GELRAQREMHRRLIELADPLIRRVTEDLRGCQLLLATPDATVLKSYGQRFVLNDRFHIGA
GINLDERWFGTNAPALALIERAPVLVKSCEHLLFPDNPVSCVAAPLFDLNGDCLGLIDLT
FEANHPRPEIFLRRVQQLTGALEQRLFFHHYQQRWVLQVHASLAELDGVSCGLVAMNDSG
LILAVDSQAAQWLGEASASLIGRHIEELLGNSWKEICRQCERCSVLLGLPLTGAQLVGRL
NPPDQWQPAIFSGEATVMPASPEPFLSRGLEALVEDWPMALAREARRASRALEAGLPVLL
QGKTGTGKEQLARALHSSLGEQRPFLALNCAALPESLIEAELFGYVEGAFTGARKGGYSG
RLVQANGGTLMLDEIGDMPLALQARLLRVLQERVVTPLGDHREVPIDCRVIAASHRDLES
LVTTGDFREDLFYRLAGVVVELPTLNEQADLAGQIRQHWAALCRQHGRSLALDESLLECL
TAYLWPGNWRELIHCLEAALVGAEPECQRLTIEGLSPRWQRKLAQPIESGVRNTVTSEGL
GNGCQELREMERTHIVRTLEAHGGNMTAAARTLGISRSTLYRRLGEASP
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgatctccaaaacagtcctgagaacccccgacgtgattctccaggcccgtgaacatctg
ctccgtggccagcaactaccgatgggcatgctcgatgccagtatcgaccgttcttggcag
cgctgcattgagcatggactgcagcttggtagcctacccgagttgccgcggctcgacagt
ggcgaactccgcgctcagcgcgagatgcatcgtcgccttattgaactggctgacccgctg
atcaggcgagtgactgaggacctgcgtggctgccaattgctgctggccaccccggatgcc
accgtgctcaagagctacggccagcgattcgtgcttaatgatcgctttcacatcggggct
ggcatcaacctggatgaacgctggttcgggaccaatgcacctgccctagcgctcatcgag
cgggcaccggtgctggtcaagtcctgcgagcatctgctgttccccgacaaccctgtttcc
tgtgtagccgccccgttgtttgatctcaacggcgactgtttaggattgatcgaccttacc
ttcgaggccaatcaccctcgaccagaaattttcctgcgccgagtgcagcagctcacgggg
gcgttggagcaacggctgtttttccaccactaccagcagcgttgggtgctccaggtgcac
gcatcgctggctgagttggacggcgtgagttgtggtctagtggcaatgaacgactcgggg
ctgatcttggcggttgattctcaggccgcccaatggctgggcgaggcctctgcctcacta
attggtcgccatattgaagaattattgggcaattcctggaaggaaatctgtcgtcaatgc
gaacggtgttcggtcttgctggggctgccgcttaccggcgcccaactggtggggcggctc
aatcccccggatcagtggcagccggcaatttttagcggagaagccacggtgatgccggcg
tcacccgaaccattcctctctcgtgggcttgaggcgctggtggaggactggcccatggcg
ctggcccgggaggctcgccgagctagccgggcactggaagcgggtttgcctgtactgctg
cagggcaaaactggcaccggaaaagagcagttggctcgagcactgcatagcagtctcggt
gagcagcggcccttcttggcacttaactgcgcagcgctgcccgaaagccttatcgaggcg
gagctattcggctatgtggaaggcgcctttaccggcgcccgtaagggcgggtacagcggg
cgtctggtacaagctaatggtggcactttgatgctcgacgagatcggtgacatgccgctg
gcgctgcaggcccgtctgctgcgggtgttgcaggagagagtggtgacgcctctgggcgat
caccgcgaggtacccatcgactgccgagtaatagccgctagccatcgcgatttggaaagt
ctggtgacaaccggtgacttccgcgaagatcttttttatcgtctggctggggtggtagta
gagcttcccacgctgaacgagcaggctgatctcgcgggacagattcgtcaacactgggcc
gcgctatgtcgccaacatggccgctctctggcgctggatgaatccttattagagtgtttg
actgcctacctttggcccggcaactggcgggaactaatacactgtttagaagcggctctg
gtgggagctgagccagagtgccaacggctaaccatagaagggctttcgccgcgttggcag
cgtaagcttgctcagcccatagaaagtggcgttcgtaatacggtcacatcggagggcctt
ggcaacggttgccaagaactgcgagaaatggagcgaacccatatagtacgtacgctcgaa
gcccatgggggaaacatgactgccgcggcccggacgctaggtatcagccgctcgacgctt
tatcgacggctgggggaagcgtcaccttga
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