Halomonas campaniensis: FF32_08295
Help
Entry
FF32_08295 CDS
T03198
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hcs
Halomonas campaniensis
Pathway
hcs00260
Glycine, serine and threonine metabolism
hcs00460
Cyanoamino acid metabolism
hcs00630
Glyoxylate and dicarboxylate metabolism
hcs00670
One carbon pool by folate
hcs00680
Methane metabolism
hcs01100
Metabolic pathways
hcs01110
Biosynthesis of secondary metabolites
hcs01120
Microbial metabolism in diverse environments
hcs01200
Carbon metabolism
hcs01230
Biosynthesis of amino acids
hcs01240
Biosynthesis of cofactors
hcs04981
Folate transport and metabolism
Module
hcs_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
hcs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FF32_08295 (glyA)
09102 Energy metabolism
00680 Methane metabolism
FF32_08295 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FF32_08295 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FF32_08295 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FF32_08295 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FF32_08295 (glyA)
Enzymes [BR:
hcs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FF32_08295 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AIA74838
LinkDB
All DBs
Position
1830272..1831585
Genome browser
AA seq
437 aa
AA seq
DB search
MLQSNFSPKARLASYDSLLAEAIAEETVRQEAHIELIASENYTSQLVMEAQGTQLTNKYA
EGYPGRRYYGGCEFVDKVEALAIERACNLFSANYANVQPHSGAQANAAVFMALVKPGDTI
LGMSLAHGGHLTHGAAPNFSGKHYNAIQYGLKPETGEIDYEEVERLAREHQPKMIIAGFS
AYSRVVDWRRFRTIADEVGAYLMVDMAHVAGLVAANLYPSPLPHAHVVTTTTHKTLRGPR
GGLILSADGDEALYKKLNGAVFPGQQGGPLMHVIAAKAVAFKEAMSQDFVRYQQQVIDNA
QAMANVFMERGYDVVSGGTDDHLFLVSLIQQGVTGKDADAALGRAHITVNKNTVPNDPQS
PFVTSGLRIGTPAVTTRGFNAQECGELAGWICDILDVLAAGSDTAAIEAEVLAKVSDVCA
RHPVYAEAVAEAVESIA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaagtaatttttccccaaaagcacgtttggccagttacgacagtttgcttgca
gaagcaattgctgaagaaacggtacgccaagaagcgcatattgagctgatcgcctccgaa
aattacaccagtcaacttgtcatggaagcgcaaggtacccaactgactaacaagtatgcg
gaaggctatccaggccgtcgctactacggcggttgtgaattcgttgacaaggttgaggcc
ttagccattgagcgtgcctgcaacttatttagtgccaattatgccaatgtgcagccgcat
tccggtgctcaggcaaatgccgctgtgttcatggcactcgtcaaacctggcgatactatt
ctaggtatgagccttgcccacggcggccatttaacccacggcgccgcccctaacttctcg
ggcaaacactacaacgctattcagtacggcctcaagccggaaaccggtgagatcgattac
gaagaagttgagcgtttggcacgtgagcatcagccgaaaatgatcattgccggtttctct
gcctactctcgcgtggtggattggcgtcgtttccgcactatcgctgatgaagtgggtgct
tacttaatggtcgacatggcccacgttgcaggtttagtggcagctaacctttatccgagc
ccgctgcctcatgcccacgtcgtcaccacgactacccacaaaacgctgcgtggcccccgt
ggcggcctgattctgtctgcggatggcgacgaggcgctctataaaaagcttaatggtgcg
gtcttcccaggccagcaaggtggcccattgatgcatgttatcgcggcgaaagcggtggcg
ttcaaggaagccatgagccaggattttgtgcgttaccagcagcaggtgattgacaacgcc
caagccatggccaacgtattcatggagcgcggctatgatgtcgtgtcgggtggtaccgat
gatcatcttttcttagtctcgcttatccagcagggcgtcacgggtaaggatgcggatgca
gcattgggccgcgcgcatatcaccgttaataagaacacggtgcccaatgacccgcagagc
cccttcgtgacatcgggtctacgtattggtacccccgcggttaccacgcgtggcttcaat
gcccaagagtgtggcgaactagctggctggatttgcgacatcctagacgtattagctgct
gggagtgataccgctgccattgaggccgaggtgctggctaaagtgagtgacgtgtgtgcc
cggcaccctgtctatgctgaagctgtcgctgaagccgtcgaatctattgcttga
DBGET
integrated database retrieval system