Halomonas campaniensis: FF32_08905
Help
Entry
FF32_08905 CDS
T03198
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
hcs
Halomonas campaniensis
Pathway
hcs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FF32_08905 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcs03021
]
FF32_08905 (rho)
03019 Messenger RNA biogenesis [BR:
hcs03019
]
FF32_08905 (rho)
Transcription machinery [BR:
hcs03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FF32_08905 (rho)
Messenger RNA biogenesis [BR:
hcs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FF32_08905 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
AAA_25
NACHT
AAA_22
AAA
Fungal_virus_P2_C
Motif
Other DBs
NCBI-ProteinID:
AIA74957
UniProt:
A0A060B7Q4
LinkDB
All DBs
Position
1959693..1960952
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKQKTVPELLDIAREMGIDNLARSRKQDIIFAILKKHAKSGEDIYGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRKGDSISGKIRPPKEGERYFALLKVSQIN
FDRPENAKHKILFENLTPLFPDDRLRMEIGNGSTEDLTARIIDLTAPIGKGQRGLLVSPP
KAGKTLMLQNIATSITRNNPECHLIVLLIDERPEEVTEMSRTVRGEVVASTFDEPPARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPSSGKVLTGGVDAHALEKPKRF
FGAARNIEEGGSLTIIATALVDTGSKMDEVIFEEFKGTGNMEAHLDRKLAEKRVFPAINI
RRSGTRREDLLASEDEMQRMWILRKLLNPMEDTAATEFLIDRLKDTKTNLEFFEAMKRR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcactgaactcaagcaaaaaaccgttcccgagctgctcgatatcgcccgcgag
atgggtatcgacaacttagcccgttcgcgcaagcaggacatcattttcgccatcctcaaa
aagcatgctaaaagtggagaggatatttatggcgatggtgtgctggaaatccttcaggat
ggcttcggcttcctgcgtagcgctgacagctcgtacctcgctggaccggatgatatctac
gtatcgccgtctcagatccgtcgtttcaatctgcgtaaaggcgactccatttccggcaaa
atccgcccgcctaaagaaggtgagcgctactttgccctgctcaaagttagccagatcaac
tttgatcgtccggaaaatgccaagcataagattctctttgagaacttaacgccgctgttc
ccagacgaccggctgcgcatggagattggtaatggctctaccgaagatcttaccgcgcgc
atcattgacctgactgcgccgattggtaaaggtcagcgcggtctattggtgtcaccgcct
aaagcgggtaagacactgatgctacagaacatcgcgacgtccattacgcgcaacaatcct
gagtgccatctgattgtattgctgatcgatgagcgtcctgaggaagtgaccgaaatgtca
cgcaccgtgcgtggcgaagtggttgcctctaccttcgatgaaccacccgcccgccacgtg
caggttgcagaaatggttatcgaaaaagccaagcgtctagtagagcacaagaaggacgtg
gtgattctgcttgactccatcactcgtctagcacgtgcctacaacaccgtagtgcccagc
tccggcaaagtgctaaccggtggtgtggacgctcacgctcttgagaagccaaaacgtttc
ttcggtgccgcgcgtaatatcgaagagggcggtagcctgacgattattgccactgcgctg
gtcgatactggttcgaaaatggacgaagttattttcgaagagttcaagggcaccggcaac
atggaagcgcaccttgaccgcaagctggctgagaaacgcgtgttccccgcgatcaatatc
cgtcgcagcggtactcggcgtgaagacctattggcgtctgaagatgaaatgcagcgcatg
tggattcttcgcaagctgctcaacccgatggaagacacggctgctacagagttcctgatt
gatcgtctgaaggataccaagacgaatctggagttctttgaagcaatgaagcgccgctag
DBGET
integrated database retrieval system
