Halomonas campaniensis: FF32_09945
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Entry
FF32_09945 CDS
T03198
Name
(GenBank) exodeoxyribonuclease
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
hcs
Halomonas campaniensis
Pathway
hcs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FF32_09945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcs03400
]
FF32_09945
Enzymes [BR:
hcs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
FF32_09945
DNA repair and recombination proteins [BR:
hcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
FF32_09945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
sCache_3_2
Phage_GPO
IF-2B
UPF0242
Motif
Other DBs
NCBI-ProteinID:
AIA75155
LinkDB
All DBs
Position
complement(2191138..2192478)
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AA seq
446 aa
AA seq
DB search
MPDTPQALSVSQLNQRAKQTLERDVGEVWVEGELSNVSRPASGHIYFTLKDDRAQIRCAL
FRQRARFVAAPMRDGDQVKLRGRVSLFEPRGDYQLIADAVQAAGLGELLAAFERLKAQLE
GEGVFANTRPLPFPPRKILILSSASGAAIRDVLAVLAARWPLADVTLIPVPVQGAEAAPA
MISALGLLNRQARLDPDQDVVLITRGGGSLEDLWAFNNEHLARAIFHSRLPVMSAVGHEV
DVTLADFAADIRAPTPSAAAERLVPDQHALKQQLTQLENRLQRAMQARLERDSQRLDTLR
ARLRHPGEQLERQRQHVTALCQRLQRAMQQTVQQQQVRVTQLSKRLASQDMVRLHRAEQE
RVSQLQRRLANAMQRALEVRQARLSSAARELNAISPLAVLGRGYAIAQDEKGHVIRRAED
TAPGQKLSLRLGEGRLNVEVKRRYKQ
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatacaccacaagcgctttctgttagtcagttgaatcagcgtgccaaacagacc
cttgagcgcgatgtgggcgaagtgtgggtagagggcgagctttccaatgtttcccgcccg
gcatctgggcatatttacttcactttgaaggatgaccgtgcacaaattcgctgtgcgctg
tttcgccagcgggcgcgttttgtggcggcaccgatgcgtgatggcgatcaggtaaaacta
cgcggtagggtctcgctgttcgaaccgcgcggcgactatcagttgattgccgacgccgta
caggcggcgggcttgggggaactgctggcggcgtttgagcgcctcaaagcgcaattggaa
ggcgaaggcgtgtttgccaatacacgccccctgccctttcctccccgcaaaattctgatt
ttaagctccgccagcggcgcagccattcgcgatgtgctggcggtactggcggcgcgctgg
ccactggcagatgtcacgctgatcccagtgcctgtacaaggcgccgaggccgcccctgcg
atgatttcggcgctggggttactgaaccgacaggcgcgcttagaccctgaccaggatgtg
gtactgatcacccgcggcggcggtagcttagaagacctttgggcgtttaataacgagcat
ctggcacgggcgatttttcactcccgcttgccagtgatgtcggcggtgggtcacgaagtg
gatgtcaccctggcggatttcgccgccgatatacgcgcccctaccccatcagcagcggcc
gagcgtttagtgcctgaccaacatgcacttaagcagcaattaacacagctagaaaaccgc
ttacagcgtgccatgcaggcacgcttagagcgggatagccaacggttggatactttgcgc
gcccgccttcgccacccaggcgagcagcttgagcgtcaacgccagcacgttaccgccctt
tgccaacggctgcagcgcgccatgcagcaaaccgttcagcagcagcaagtgcgggtcacc
cagttaagcaaacgcttagccagccaagacatggtgcgcctgcaccgcgcagagcaagag
cgtgttagtcagctccagcgccgtttagccaacgctatgcagcgagcgctggaagtgcgt
caggcgcgcttgagtagcgccgcccgtgaactaaatgccatcagcccgcttgcggtgttg
gggcgcggctatgccattgcccaggatgaaaagggccatgtcattcgccgggcagaggac
accgcaccaggccagaagctctcgctacggctgggtgaaggcaggctaaacgtggaagta
aaacggcgctacaaacagtag
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