Halomonas campaniensis: FF32_12215
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Entry
FF32_12215 CDS
T03198
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hcs
Halomonas campaniensis
Brite
KEGG Orthology (KO) [BR:
hcs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcs03016
]
FF32_12215
Enzymes [BR:
hcs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FF32_12215
Transfer RNA biogenesis [BR:
hcs03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FF32_12215
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
AIA75576
LinkDB
All DBs
Position
2672686..2673819
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AA seq
377 aa
AA seq
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MSSLAPSLYQWIDSADALDAACEQVAGASVIALDTEFFRENTFFPVPALIQFTTGDMAYL
VDPLSTPCTAAFRDLLQKNSAIKLLHACSEDLEVFQHWAGVLPAPLIDTQVAQAFLGETP
GMGYQKLVEHWMGETLPKEETRSNWLERPLTPSQCEYAALDVIYLLKVWGLQAEKLEQLG
RREWLDDECASLIEQAGRSVESDGQWYTRQRQLWRLDPRQLEAYRLMTIWREGETRRRDL
PRNWLVSDKLLFAVAEKMPKNRYELAEIEGVKPPLVKKEGDTLLSLVKQAQHCPEGDLPA
RWPDPMHPVFKRRFKALKKVVTEKAAELQIAPEMLLRRRDIEALVMQRLANQPLTTPGGW
RDAYLTQEIHQALEELS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
ttgtcctctttagccccctcgttgtatcaatggattgatagtgccgacgccttagatgct
gcatgcgagcaagttgccggtgccagtgtgattgccttagatactgaatttttccgtgaa
aacacgttttttccggtgccagcgcttattcagttcaccaccggtgacatggcgtattta
gtggacccgttgagcacgccttgcaccgctgcttttcgtgatttgttgcagaagaatagt
gccatcaaattactgcatgcctgtagcgaagacctcgaggtgttccagcactgggccggc
gtattgccagcaccgcttatcgatacgcaagtcgctcaggcttttttgggagaaactccc
ggcatgggctatcaaaaattggtagagcactggatgggggaaacgctgcctaaagaggag
acgcgttccaactggttagagcgccccttaacgccctcccagtgcgaatatgcggcgtta
gatgttatctatttgctgaaggtttgggggcttcaagcggagaagcttgaacaactgggg
cggcgcgaatggcttgacgatgagtgtgccagtcttatcgagcaggcaggtcgcagcgta
gagagcgatggccaatggtatacgcgccagcggcagttgtggcgccttgatcctcgccag
cttgaagcctaccgcttaatgaccatctggcgggaaggcgaaacccgccgtcgggatttg
ccgcgtaattggttggttagcgataagttgttgttcgcggtggctgaaaaaatgcctaaa
aatcgttatgagctagcagaaattgaaggggttaagccgcccctggttaaaaaagaaggc
gatacgctgctgtcgctggtgaaacaggctcagcattgccctgaaggtgatttaccggcg
cgctggccagacccgatgcatcctgtgtttaagcggcgctttaaagcacttaaaaaagta
gtgacggagaaggctgctgagctacaaatagcgcccgagatgttgctgcggcggcgagat
attgaggcgcttgtgatgcagcggcttgctaaccagccattaaccactcctggcggctgg
cgtgatgcctatttaactcaagaaattcatcaggcgcttgaggagttgtcgtaa
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