Halomonas campaniensis: FF32_16240
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Entry
FF32_16240 CDS
T03198
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hcs
Halomonas campaniensis
Pathway
hcs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FF32_16240 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcs03019
]
FF32_16240 (groEL)
03110 Chaperones and folding catalysts [BR:
hcs03110
]
FF32_16240 (groEL)
03029 Mitochondrial biogenesis [BR:
hcs03029
]
FF32_16240 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hcs04147
]
FF32_16240 (groEL)
Enzymes [BR:
hcs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FF32_16240 (groEL)
Messenger RNA biogenesis [BR:
hcs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FF32_16240 (groEL)
Chaperones and folding catalysts [BR:
hcs03110
]
Heat shock proteins
HSP60 / Chaperonin
FF32_16240 (groEL)
Mitochondrial biogenesis [BR:
hcs03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FF32_16240 (groEL)
Exosome [BR:
hcs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FF32_16240 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
FF32_16240 (groEL)
Exosomal proteins of breast cancer cells
FF32_16240 (groEL)
Exosomal proteins of colorectal cancer cells
FF32_16240 (groEL)
Exosomal proteins of bladder cancer cells
FF32_16240 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
AIA76330
LinkDB
All DBs
Position
3482122..3483765
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKQVKFSDDARKRMARGVDVLANAVKVTLGPKGRNVVLDKSFGAPTVTKDGVSVAKEI
ELKDKFENMGAQMVKEVASKTSDAAGDGTTTATVLAQAIVAEGLKGVTAGMNPMDLKRGI
DQAVSAAVKEIQAMSVPCTDTKSIAQVGTISANGDKRIGEIIAEAMEKVGKEGVITVDEG
RGFEDELEVVEGMQFDRGYLSPYFVTNQDTMAVELEDPYILLVDKKISNIRELLPVLEAV
AKQGKPLAIIAEDIEGEALATLVVNNMRGIVKVAAAKAPGFGDRRKAMLQDIAILTNGTV
ISEEVGLTLEQANLDHLGTAKRMTMSKENTTIIDGAGVENDIEARVNQIRAQIEETSSDY
DKEKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVEDALHSTRAAVEEGVVPGGGTALV
RVMAKVQGLTGDNEDQNHGINMALRAMQSPLRQIVTNAGEEAAVVINRVKDGEGNFGYNA
QTGEYGDLFEMGVLDPAKVTRTALQSAGSVAGLMITTECMIADDPEEKDAAPDMGGMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaagcaagttaagttctccgatgatgcccgcaaacgcatggcacgtggcgtt
gacgttctggccaacgcagtaaaagttactctcggtccgaaaggccgtaacgtggtactg
gacaagtccttcggcgcaccgaccgttactaaagatggtgtatcagttgccaaagagatc
gaactgaaagacaagttcgagaacatgggcgcgcagatggttaaggaagttgcttccaaa
acgtctgacgctgcaggcgacggtaccactacggcaacggttctggctcaagccattgtc
gcagaaggcttgaaaggcgttactgcgggcatgaacccgatggatcttaagcgcggtatc
gaccaagcggttagcgcggccgttaaagagattcaggcaatgtctgttccttgcaccgac
accaagtcgattgctcaggtaggcacaatctctgctaacggcgacaagcgcattggcgag
atcatcgctgaagcgatggaaaaagtcggtaaagaaggcgtcatcaccgttgatgaaggc
cgtggcttcgaagacgagctggaagtcgttgaaggtatgcagtttgatcgcggctacctc
tcgccctacttcgttaccaaccaagacaccatggctgtcgagctggaagacccttacatc
ctgctcgtagacaagaaaatctccaacatccgcgaattactgccggtgctggaagcggtt
gctaagcaaggtaaaccgctcgcgattatcgctgaagatatcgaaggcgaagcgctagca
acgctagttgtgaacaatatgcgcggcatcgttaaagttgctgcagctaaagcacctggc
ttcggcgaccgtcgcaaagcgatgctgcaggatatcgctatcctgactaacggcaccgtg
atttctgaggaagttggcctgacgcttgagcaagcgaacctggatcacctgggtaccgct
aagcgcatgacgatgtctaaagaaaacaccaccatcatcgatggcgctggtgtcgaaaat
gacatcgaagcacgcgttaaccagatccgtgcgcaaatcgaagaaacctcttctgattac
gacaaagagaagctgcaagagcgcgttgccaagctggcaggcggcgttgctgttattcgc
gtcggtgcggctaccgaagttgaaatgaaagagaagaaagctcgtgttgaagatgcgctg
cactcaacccgcgctgcagtagaagaaggcgttgtacctggtggcggtactgcactggtt
cgcgtcatggctaaagtacagggcctgactggcgacaacgaagaccagaaccacggtatc
aacatggcgctgcgcgctatgcagtctccgctgcgtcagattgttaccaatgccggtgaa
gaagctgctgttgttatcaaccgcgtgaaagatggtgaaggtaacttcggctataacgca
caaacgggtgagtacggcgacctgttcgaaatgggtgttctggacccggctaaagtaacc
cgtactgcactgcagtccgctggttctgtcgctggcctaatgatcaccactgagtgcatg
attgctgacgatcctgaagagaaagacgctgctccagacatgggtggcatgggcggaatg
ggtggcatgggcggcatgatgtaa
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