Halomonas campaniensis: FF32_17335
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Entry
FF32_17335 CDS
T03198
Name
(GenBank) lipid transporter ATP-binding/permease
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
hcs
Halomonas campaniensis
Pathway
hcs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hcs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FF32_17335
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcs02000
]
FF32_17335
Enzymes [BR:
hcs01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
FF32_17335
Transporters [BR:
hcs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
FF32_17335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
AAA_29
nSTAND1
DUF87
RsgA_GTPase
AAA_30
MMR_HSR1
AAA_21
AAA_25
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AIA76536
LinkDB
All DBs
Position
complement(3722104..3723840)
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AA seq
578 aa
AA seq
DB search
MTDSGWVLYKRLLTYVKPHWRAFALAIIGFVIYAASSTALAEMMKRLIDGIQNPDAAFRF
FLPLFVVIMFAARGLGTFLSTYFMAYVGRYVIHTLRCDVFAHLLHLPGRFFDHHSSGHLV
SRVTYHVEQVAGAATNAVTIILREGLFVIGLISYLFWTNWMLTLLFLGVTPVISVVVGYV
SKRFRRISKRIQHSMGDVTHVASEALSGYRVVRTHGAEEYEKQRFERVSEENRRQSMKEA
MTRAVSSPVILMLVAISMAILVWLAMAPALMENMTPGEFVAFITAAALMIKPVRQLTEVN
SEIQKGIAAASELFGLLDLTPEQDEGKTIPHQLTGSVVIDNVSFRYADDQPNVLHDINIS
VAPGELVAIVGRSGSGKSTLVSLLPRFYQPSEGRILIDGVNAGDYALGPLRQHIALVSQQ
VTLFNATIADNIGYGVTNPDPAAIEAAAQAAYASEFIEKLPQGYATVVGENGVMLSGGQR
QRLAIARAIFKDAPILILDEATSALDTESERYIQKALEHVCEGRTTLVIAHRLSTIERAD
RILVMDQGRIIEQGTHQALLDAGGAYAALHQLQFQESE
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
gtgactgattcaggttgggttctctacaagcgattattaacttacgtcaaacctcactgg
cgcgcattcgcgttagcgataatagggtttgttatttatgctgcatcgagtacagcattg
gccgaaatgatgaagcgattgattgatggcatccagaaccctgatgctgcctttcgtttc
tttttgcctttgtttgtcgtgattatgtttgcggcgcgagggctagggacatttttaagt
acctactttatggcgtatgtggggcgctatgtgattcatacgctgcgctgtgatgtgttt
gctcatttactacacctacctgggcggttctttgatcaccattccagcggccatttggta
tcgcgggtgacttatcatgtggagcaagtagcgggtgcagctaccaacgcggttaccatt
attcttcgtgaaggattatttgttattgggttgattagctatttgttctggactaactgg
atgttaacgctgctttttttaggtgtaacaccagtgatctctgttgtagtggggtacgtt
agtaagcgttttaggcgtatctctaagcgtatccagcactctatgggagatgttactcac
gtcgcttctgaagcgctctccggctatcgcgtcgtgcgcacgcatggtgctgaggagtat
gaaaaacagcgctttgaacgagtaagtgaagaaaatcgtcgtcaaagtatgaaagaggcg
atgacgcgtgccgttagctcacctgtgattttgatgctggtagcgatttccatggctatt
ctggtttggcttgccatggcgcctgcgcttatggaaaacatgacgccgggagagtttgtt
gcctttattaccgcggcagcgctaatgatcaagcctgtgcgccagctcacagaagtgaat
agtgagattcaaaaaggcattgcggcggcttctgagctatttggcttgcttgatttgact
cctgaacaggatgaaggtaagacaattccccatcagctaacaggcagcgtggtgatcgat
aatgtcagtttccgctacgctgatgatcagcctaatgtattgcacgatattaatataagc
gttgcaccgggtgagttagtggcgattgttggccgctctggcagcggtaaatcaaccttg
gtcagcctgctgccgcgtttttatcagcccagcgaaggacgcattttgattgatggtgtg
aatgccggtgattatgcgttaggccctttgcgccagcatattgcattggtatcgcaacaa
gtcacgctatttaatgcaaccattgctgacaacattggctatggcgttactaacccagac
ccagccgctattgaagcggctgctcaggcggcttacgccagtgagtttattgagaagttg
cctcagggctatgcaacggtggtaggtgaaaacggtgtgatgttatccggtggccagcgc
cagcgcctagcaatcgctcgggcgatttttaaagatgcacctattcttatcctggacgaa
gcgacatcggcactggataccgaatccgagcgctatatccagaaagcgctggagcatgtg
tgtgaagggcgtaccacattggtcattgcccaccgtctatccaccatcgaacgggctgac
cgtattttggtgatggatcaagggcgcattattgagcagggtacccaccaggcgttgcta
gatgcgggaggggcctacgcggcactgcatcagctccagtttcaggagagtgaatga
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