Candidatus Hodgkinia cicadicola TETULN: HCTETULN_018
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Entry
HCTETULN_018 CDS
T03202
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hct
Candidatus Hodgkinia cicadicola TETULN
Pathway
hct03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
hct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HCTETULN_018 (dnaQ)
03430 Mismatch repair
HCTETULN_018 (dnaQ)
03440 Homologous recombination
HCTETULN_018 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hct03032
]
HCTETULN_018 (dnaQ)
03400 DNA repair and recombination proteins [BR:
hct03400
]
HCTETULN_018 (dnaQ)
Enzymes [BR:
hct01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HCTETULN_018 (dnaQ)
DNA replication proteins [BR:
hct03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HCTETULN_018 (dnaQ)
DNA repair and recombination proteins [BR:
hct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HCTETULN_018 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Maelstrom
Motif
Other DBs
NCBI-ProteinID:
AIC63768
LinkDB
All DBs
Position
complement(16518..17066)
Genome browser
AA seq
182 aa
AA seq
DB search
MKELIIDTETTGLDYKRDRIVELAIVEFKPRGPIKKVYHSHFNPEPIKVSKEALRIHGIT
NEFLSTKPKFESEANKITQIINNNKLIAHNADFDKQMLAHELKLAHLDIPNVCWCDTLKL
AKLLNPNKSNSLRALCKKYKIKEINSKHDALSDCEMLALVYRALLSTQSQAACADSWFNN
SA
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagagctaataatagacaccgaaacaaccggattagattacaagagagacaggatt
gttgagctggcgatagtggagtttaaacctcggggcccaattaaaaaagtgtaccacagc
cactttaatcccgagcctattaaagttagtaaagaggcgcttagaatacacggcatcacg
aacgagtttctcagcacaaaacccaaattcgagtctgaagcaaacaaaataacgcaaatt
ataaacaacaacaagcttatagcgcacaatgcagatttcgataagcaaatgcttgcccac
gaactaaagttagcgcacttggacattccaaacgtttgctgatgtgacacattaaaactt
gctaagctgttaaacccgaacaaatcaaattcgctaagagcgttgtgtaaaaaatacaaa
ataaaggagattaattctaaacacgacgctctgtccgactgcgaaatgttagcgctggtt
tacagagcgctgttaagcacgcagtcgcaagctgcgtgcgccgacagctgatttaacaac
agcgcttaa
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