Candidatus Hodgkinia cicadicola TETULN: HCTETULN_020
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Entry
HCTETULN_020 CDS
T03202
Symbol
trmE
Name
(GenBank) tRNA modification GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
hct
Candidatus Hodgkinia cicadicola TETULN
Brite
KEGG Orthology (KO) [BR:
hct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hct03016
]
HCTETULN_020 (trmE)
Transfer RNA biogenesis [BR:
hct03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
HCTETULN_020 (trmE)
Prokaryotic type
Methyltransferases
HCTETULN_020 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
NPC1_N
Dynamin_N
SRPRB
AAA_23
TniB
Motif
Other DBs
NCBI-ProteinID:
AIC63770
LinkDB
All DBs
Position
complement(18640..19743)
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AA seq
367 aa
AA seq
DB search
MSGNNTLKVIALTLNKLVCPNRVCALKIKTCKRAHDSVVTWWPCPRSPTGEDYAEISTTG
STTIVNNVISALKKLALAQAPRGEFTRRAITNSKLSANNALELAKAFGISCNAQKLRAIA
TQICKLIVKLEARSQSGTDFKFKTHELKSLASNVERLRAARLALTCIAGKTNTGKSSLFN
AITQSKNSITSSSQGTTRDTVRARCHGIIWADTAGFKRVENKTELSAMLASLDYVKRANT
IIALHTVSQKTAFFRSKSLCNVTQVVSKSDLTHKLERACGLNFASAYSLEGVNALTQRVC
CKAKQTSEVNIVQNNVLTQAKALISQCASNENTAFWIKALTSARTVLMGALAAPTIDKLL
SQFCLGK
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
ttgtctggtaacaacacactcaaggttatagcgctaacgctaaacaaactcgtttgcccg
aacagagtttgtgcgcttaaaattaaaacttgcaaaagagcacacgacagcgttgtaaca
tgatgaccttgccctcggtcgccgacgggcgaagattacgccgaaataagcacaacagga
tctacaacaattgttaacaacgtaataagcgcgctgaaaaagcttgcgttggcgcaagcg
ccgagaggggagttcacaaggagagcaataactaacagcaaacttagcgctaacaacgcg
ctagagctagcaaaggcattcggaataagttgcaacgcgcaaaaactaagggccatagca
acccaaatttgcaagcttattgtgaagctagaagcgcggtcccaatcgggaaccgatttt
aagtttaaaacccacgagttaaaatcgctggcttccaacgtcgagcgactaagggccgcg
cgtttagcgctaacgtgtatcgcaggaaagactaacacaggcaaatcttcgcttttcaac
gcaatcacacaaagcaaaaactcaataacaagcagctctcagggcacaacaagagacacg
gtgcgcgcgcgctgtcatggtataatatgagcggacaccgccggctttaaacgcgtcgaa
aacaaaacggagctgtcagcaatgttggcgtcgctcgactacgtaaagcgcgccaacaca
ataattgcgctacacaccgttagtcagaaaaccgcgttctttagaagcaaatctctttgc
aacgtaacgcaggtcgtgtcaaagtccgacttaactcacaagctcgaacgcgcttgtggt
ctaaattttgcatcagcgtattctttagaaggagtaaacgcgctaacacaacgtgtgtgt
tgcaaggcgaaacagacttccgaagttaacattgttcaaaacaatgtgctaacgcaagca
aaagctttaatatcgcaatgcgcttcgaacgaaaacacagcgttttgaatcaaagcgcta
accagcgccagaactgtgctaatgggcgcgcttgccgcgccaacaatagacaaactactg
agccagttttgcctcggaaaataa
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integrated database retrieval system
