Candidatus Hodgkinia cicadicola TETULN: HCTETULN_089
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Entry
HCTETULN_089 CDS
T03202
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hct
Candidatus Hodgkinia cicadicola TETULN
Pathway
hct03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hct00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HCTETULN_089 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hct03021
]
HCTETULN_089 (rpoA)
03400 DNA repair and recombination proteins [BR:
hct03400
]
HCTETULN_089 (rpoA)
Enzymes [BR:
hct01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HCTETULN_089 (rpoA)
Transcription machinery [BR:
hct03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HCTETULN_089 (rpoA)
DNA repair and recombination proteins [BR:
hct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HCTETULN_089 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AIC63834
LinkDB
All DBs
Position
68339..69025
Genome browser
AA seq
228 aa
AA seq
DB search
MPSRLSVSVHSCGYNTAAIEVEPLVKGMGQTVANALRRVLLTRIGGWALIGVCIDGAEHE
LDKLDGVKEDTIDLVLNLKRLVFGSEANAVIFKGVLSASAQGEVLAYSVCLPNGIRLFNP
SQRICYLSPKSKLRVELVIARGAGYLRAEAVSSNWGACLKGFVALDANFSPIKRVSYNVV
ESEYNFANYDKVSVLVESNGTVDLCTTIRSACVILCNQFFGLADALKQ
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
gtgccgagtaggctaagtgttagtgtgcacagctgcggatataacaccgcagctatagag
gttgagcctctagttaaaggcatggggcaaactgttgctaatgcgttaaggcgcgtgctg
ctaacgcgcatcggcggttgagcgcttatcggtgtctgtatagacggcgctgagcatgag
cttgacaagctagatggtgttaaagaggacacgatagacttggtgttaaacttaaaacgg
cttgtgtttggcagtgaagccaatgccgttatatttaaaggcgtgctgtcagcgagtgct
caaggcgaggtgctagcttatagcgtgtgtctgcctaacggcatccgtttgtttaatccg
agtcagcgaatttgctatttaagccctaaatccaagttaagagtcgagttggttatagcg
cgcggcgcgggctatttgcgcgccgaagccgtgagctccaactggggcgcttgtctaaaa
gggtttgttgcgttggatgctaacttctcgccaattaaaagggtgtcttataacgttgtc
gagtctgaatacaactttgcgaattatgacaaagttagtgtgttagttgaatcaaatggc
acagttgatttgtgcaccacaattagaagcgcttgcgtaatattgtgtaatcagtttttt
gggctggcggacgcgcttaaacagtaa
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