Hymenobacter cellulosilyticus: MUN79_00435
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Entry
MUN79_00435 CDS
T09398
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
hcu
Hymenobacter cellulosilyticus
Pathway
hcu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hcu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MUN79_00435 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hcu03021
]
MUN79_00435 (rpoC)
03400 DNA repair and recombination proteins [BR:
hcu03400
]
MUN79_00435 (rpoC)
Enzymes [BR:
hcu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MUN79_00435 (rpoC)
Transcription machinery [BR:
hcu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MUN79_00435 (rpoC)
DNA repair and recombination proteins [BR:
hcu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MUN79_00435 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
OST_IS
RnfC_N
A_thal_3526
Motif
Other DBs
NCBI-ProteinID:
UOQ72514
UniProt:
A0A8T9Q4K8
LinkDB
All DBs
Position
complement(77093..81439)
Genome browser
AA seq
1448 aa
AA seq
DB search
MAFAKNKKLVQDFSKVTISLASPESILERSNGEVVKPETINYRTYKPEMGGLFCERIFGP
VKDWECHCGKYKRIRYKGIICDRCGVEVTEKKVRRERMGHIELVVPVAHIWYFKSLPNKI
GYLLGLPTKKLDQIIYYERYVVVQPGVLAEEGVQQLDFLTEDEYLDIIDKLPRENQMLPN
EDPNKFIARMGADALQLLLERTNLDELSYSLRDSAAHETSQQRKAEALKRLRVVEAFRDA
ATRIENKPEWMVIRMVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLIEIK
APEVILRNEKRMLQEAVDSLFDNSRKVNAVRAEGNRALKSLSDMLKGKQGRFRQNLLGKR
VDYSGRSVIVVGPELKLHECGLPKNMAAELFKPFIIRKLIERGIVKTVKSAKKIVDRKDA
VVWDILENVLKGHPVLLNRAPTLHRLGIQAFQPRLIEGKAIQLHPLVCTAFNADFDGDQM
AVHVPLGPAAILEASMLMLASHNILNPANGAPIAVPSQDMVLGLYYVTKGKRSTDDEKIQ
GEGRMFYSDEEVVIALNEGQLSKHAYIKVRTQVRDEEDNLVTKIIETVAGRVLFNQLVPT
EVGFVDELLTKKKLQQIISMVFKRTGMARTAQFLDDIKTLGFQSAYKGGLSMGLGDIQIP
KEKDALVLQAQNDVKAVTQNYQMGLITDNERYNQVIDIWTRINNQITETLMGRLEKENQG
FNSIYMMMHSGARGSREQIRQLGGMRGLMAKPQKSLQGSVGEIIENPILSNFKEGLDVIE
YFISTHGARKGLADTALKTADAGYLTRRLVDVSQDVIVNENDCGTLRGIETFALKDNEDV
VEPLAERILGRVAVHDIVDPLTDEVILPAGTEITEEITRRIDATAIESVEIRSVLTCESK
RGICAKCYGRNLSSGRMVQKGEAVGVIAAQSIGEPGTQLTLRTFHVGGTASNIAVEASLR
AKFAGVVEFEDIRTVDSVNAEGEPVKVVMGRSGEIRIVEKGTGKVYISNHVPYGSFLLVN
EGQEVEKGQELNNWDPYNAVILAEFDGTVQYDAITEGVTYREESDEQTGHREKVIIESRD
KAQNPSIIVKAGKKDAEEGQRGYSIPVGSHINVDNGEKIKAGHILAKIPRAVGKTRDITG
GLPRVTELFEARNPSNPAVVSEIDGVVTYGTVKRGNREIFVESKDGVKKKYMVPLSKHIL
VQDNDFIRAGMPLSDGAITPSDILSIQGPGAVQEYLVNEIQEVYRLQGVKINDKHIEVVV
RQMMQKVVILDAGDTTFLEHQVIDKIVFMEENDTIIDMKVVTNAGDSTNLKPGQIVSARR
LRDENSSLRRRDLALVEVREAQPAVSRPTLQGITQASLGTQSFISAASFQETTKVLSEAA
IRGKADELLGLKENVIVGHLIPAGTGLREYTRQVVGSKDEPEVTAPAKSDAPEPKTRASR
AKREVSAD
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttgcaaaaaacaaaaaactggtacaggacttctcgaaagtcactatttcgctg
gcctcgcccgaatccattctggagcggtcgaacggcgaagttgtgaagccggagaccatt
aactaccggacgtacaagcccgaaatgggcggcctgttctgcgagcggattttcggtccc
gtgaaggactgggaatgccactgcggtaagtacaagcggattcgctacaaaggcatcatc
tgcgaccgttgcggcgtggaggtgaccgagaagaaagtacgccgggagcggatgggccac
atcgaactggtggtgcccgtagcgcacatctggtacttcaagtcgttgccaaacaaaatc
ggctacctgctgggcttgcccaccaagaagctcgaccaaattatctattacgagcggtac
gtagttgttcagcctggtgtacttgccgaagaaggcgtacaacagctggacttcctgacc
gaagacgaatacctcgacatcatcgacaagctcccccgcgagaaccagatgctgcccaac
gaggaccccaacaaattcattgcccgcatgggggcggatgctctgcagctgttgctggag
cgcaccaacctcgacgagctttcctatagcctccgcgactcggctgcgcacgagacttcg
cagcagcgtaaggctgaggcgttgaagcgtctgcgcgtagtagaagcgttccgcgacgcg
gctacccgcatcgagaacaagcccgagtggatggtcatccgcatggtgccggtgattccg
ccggaactgcgccccctcgtgccgttggatggtggccgtttcgctacttccgacttgaac
gacctgtaccgccgcgttatcatccgcaacaaccgcctcaagcgcctgatcgaaatcaag
gctcccgaggtgattctgcggaacgagaagcgcatgctgcaggaagccgttgactccctc
ttcgacaactcgcgtaaggtaaacgccgtgcgcgccgaaggcaaccgtgccctgaagtcg
ctgtccgatatgctgaaaggcaagcagggccgcttccgtcagaacctgctcggtaagcgt
gtcgactactccggtcgttcggtaatcgtggtaggtcctgagctaaagctgcacgagtgc
ggtctgcccaagaacatggcggccgagctgttcaagcccttcattatccgtaagctcatt
gagcgcggtatcgtgaagacggtgaagtcggccaagaagattgtggaccgcaaggacgcc
gtggtatgggacatcctggagaacgtgctgaaaggccacccagtgctcctgaaccgggct
ccaaccctgcaccgcttgggtatccaagcattccagccccgcctcatcgagggcaaggct
atccagctgcacccgctcgtttgtacggccttcaacgctgactttgacggtgaccagatg
gctgtgcacgttcccctgggaccggctgctatccttgaagcctccatgctgatgctggcc
tcgcacaatatcctgaacccggccaacggcgcgcccatcgcggtaccgtcgcaggacatg
gttctgggtctgtactatgtaaccaaaggcaagcgcagcaccgacgacgagaagatccaa
ggcgaaggccgtatgttctactcggatgaggaagttgtaattgccctgaacgaaggtcaa
ctgtcgaagcacgcctatatcaaggtgcgcacgcaggttcgcgacgaggaagataacctc
gtaacgaagatcatcgagaccgtagccggccgcgtgctgttcaaccagctcgtgccgacc
gaagtaggcttcgtagatgagctgctgaccaagaaaaagctgcagcagatcatttcgatg
gtgttcaagcggactggcatggcccgcaccgcacagttcctcgacgacatcaagacgctg
ggtttccagtcggcttacaaaggaggtctgtcgatgggtctgggcgacatccaaattccg
aaagagaaagatgccctggttctgcaagcgcagaacgacgtgaaggccgttactcagaac
taccagatgggtctgattaccgacaacgagcgttacaaccaggttatcgacatctggacc
cgcatcaacaaccaaatcactgaaaccctcatgggtcgcctcgaaaaggagaaccagggc
ttcaactcgatttacatgatgatgcactccggcgcccgtggttcgcgtgagcagattcgt
cagctcggcggtatgcgtggtctgatggctaagccccagaagtcgttgcagggttcggtg
ggtgagattatcgaaaacccgattctgtcgaacttcaaagaaggcctggacgtaatcgag
tacttcatttcgacccacggtgcccgtaagggtctggccgatacggctctgaagacggct
gacgccggctatctgacccgtcgtctggtggacgtgtcgcaggacgtaatcgtaaacgaa
aacgactgcggtaccctgcgtggcatcgaaacctttgcgttgaaagacaacgaggacgtg
gtagagcccctggctgagcgtatcctgggccgcgtggccgttcacgacatcgtggacccg
ctgacggacgaggtaatcctgcccgctggtacggaaatcaccgaggaaatcacccgccgc
atcgatgctacggctattgagtcggttgaaatccgctcggtactgacctgcgaatcgaag
cgtggtatctgcgccaagtgctacggccgtaacctgtcgtcgggccgcatggtccagaag
ggtgaagctgtaggcgtaattgccgctcagtcaattggcgagcccggtacccagcttacg
ctgcgtaccttccacgtaggtggtacggcttctaacattgctgttgaagccagcctgcgc
gccaagttcgccggtgtggttgagttcgaagatatccgtactgttgactccgtaaacgcc
gaaggcgagccggtgaaagtagtaatgggtcgttcgggcgaaatccgcatcgtggagaaa
ggcaccggtaaggtctacatctcgaaccacgtgccgtacggctcgttcctgctggtcaac
gaaggccaggaggtagagaaaggccaggagctcaacaactgggacccttacaacgccgtt
atcttggccgagtttgatggtaccgttcagtacgacgctattacggaaggtgtcacttac
cgtgaggagtcggacgagcagaccggtcaccgcgagaaagtaatcatcgaaagccgcgac
aaggcccagaacccctccatcatcgtgaaggctgggaagaaggacgccgaggaagggcag
cgtggttacagcatcccggtaggttcgcacatcaacgtcgacaacggcgagaaaatcaag
gctggtcacattctggctaagattcctcgggccgtgggtaaaacccgcgacatcaccggt
ggtctgccccgcgttaccgagcttttcgaggctcgtaacccatcgaacccggccgttgtg
tcggaaatcgacggtgtagtaacctacggtactgtgaagcgtggtaaccgcgaaatcttc
gtcgagtcgaaagacggtgtgaagaagaagtacatggtgccgctgtccaagcacattcta
gtgcaggacaacgacttcatccgcgccggcatgccgctgtcggatggtgccattacccct
tcggacatcctgagcattcagggccccggcgccgtgcaggaatacctcgtgaacgagatt
caggaagtataccgcttgcagggtgtgaaaatcaacgataagcacatcgaggtggtcgtt
cgccagatgatgcagaaagttgtgattctcgatgccggcgacacgaccttcctggagcac
caggttatcgacaaaatcgtcttcatggaagaaaacgataccatcatcgacatgaaggtg
gtaacgaatgccggcgattcgacgaacctgaagcccggtcagatcgtgagtgcccgtcgt
ctgcgcgatgagaactcctcgctgcgtcgtcgcgacctagctctggtagaagtgcgggaa
gctcagccggccgtatcgcggcctacgttgcagggtatcacccaggcttcgttgggtact
cagtcgttcatctcggccgcatccttccaggagacgaccaaggtgctgtcggaagccgcc
atccgtggcaaggctgacgaactgctgggtctgaaggagaacgtaatcgtaggtcacctc
atcccggccggtaccggcctgcgcgagtacacgcgtcaggtggttgggtcgaaagatgag
cccgaggttacggctcccgcgaagtcggacgctcccgagccgaagacccgtgcctcgcgt
gccaagcgtgaagtatcggctgactaa
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integrated database retrieval system
