Hymenobacter cellulosilyticus: MUN79_21355
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Entry
MUN79_21355 CDS
T09398
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hcu
Hymenobacter cellulosilyticus
Pathway
hcu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MUN79_21355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcu03019
]
MUN79_21355
03009 Ribosome biogenesis [BR:
hcu03009
]
MUN79_21355
Enzymes [BR:
hcu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MUN79_21355
Messenger RNA biogenesis [BR:
hcu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MUN79_21355
Ribosome biogenesis [BR:
hcu03009
]
Prokaryotic type
rRNA helicases
MUN79_21355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
UOQ71179
UniProt:
A0A8T9Q6S5
LinkDB
All DBs
Position
complement(4331587..4333560)
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AA seq
657 aa
AA seq
DB search
MEKVKFEELNLSEELMRAIADLGYEEASPIQTAAIPVLLAGQDVIGQAQTGTGKTAAFGI
PAIEGVDTNSKAVQVLILCPTRELAVQVSGEIQKLGKYKRGLAVVPIYGGQSYDRQFQAL
ERGVQIVIGTPGRVMDHLERGTLKLDQVKKIILDEADEMLDMGFRDDIEVVLSKMPEDRQ
TVFFSATMSKPIMELTKKYQTNPQIVKVNHQELTVTNIEQMYYEVRNPMKKDVLSRIIDM
YNLKSTIVFCNTKRMVDECVAELQARGYFADGLHGDMGQQQRQNTLDKFRKGTLEILVAT
DVAARGIDVENVEAVVNYDLPADEEYYVHRIGRTGRAGKLGKAFTFVSGRDIYKLRDIMR
FTKANIKQERIPSFEDVSEVKTTLFLAQIKDIIEKGKLEKYVARVQRLLDQEEDITSLDV
AAALLRMTMKEDKQAEKSLEAGRQQGAVRPGFTRLFVTMGKKDRVHPRDIVDLIAENTAL
TGSKVGDIALYDKFSFVEVPSEFAEEITTKLGRTSIQGRPVSFNIATPRQEGDAQQEGNT
RGPGGFGGGEDRPRRSGGFGGERREGGFGGNRGGSYGERREGGFNRGGGSFGGNREGGYR
GGNSGGSSYGGGYKGNRDGGSSYGGGYKGKRDNDGGGFRGGNRSEGPAPRPRQDFDE
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagtaaaatttgaagagctaaacctctccgaggaattgatgcgcgccattgcc
gacctcggctacgaagaagcatcacccattcaaacggccgccattccagttctgctggcc
ggccaggatgttattggccaggcccagacgggtaccggcaaaaccgctgcttttggcatt
cccgccatcgaaggcgttgacaccaacagcaaagccgtacaagttctgattctgtgcccc
acgcgtgagctggccgtacaggtatcgggcgaaattcagaagctcggcaaatacaagcgt
ggtctagccgtagtgccaatctacggtggccagagctatgaccgtcagttccaggccctg
gagcgcggtgtgcagatcgtaatcggtacgcccggccgggtaatggaccacctggagcgt
ggtacgctgaagctggaccaggtaaagaaaatcatcctcgatgaggccgacgaaatgctc
gacatgggcttccgcgacgacatcgaggtggtactgagcaagatgcccgaagaccgccag
acggtgttcttctcggctacgatgagcaagccgattatggagctcaccaaaaagtaccag
accaacccgcagatcgtaaaagtcaaccaccaggagctgaccgttacgaacatcgagcag
atgtactacgaggtgcgtaaccccatgaagaaggatgtgctctcgcgcatcatcgacatg
tacaacctcaagtcgaccatcgtattctgcaacacgaagcgcatggtagacgagtgcgta
gctgaactacaggcccgcggctacttcgccgacggcttgcacggcgacatgggccagcag
cagcgccagaacacgctcgacaagttccgtaagggtacgctcgagattctggtagcaacc
gacgtagctgcccgtggtatcgacgtggagaacgtggaagccgtagtaaactacgacctg
cccgccgacgaagaatactatgtgcaccgcatcggccgcaccggccgcgctggtaagctg
ggtaaggccttcactttcgtgagcggccgcgacatctacaagctgcgcgacatcatgcgc
ttcaccaaggccaacatcaagcaggagcgtattccttcgtttgaggatgtgtcggaggtt
aaaaccacgctgttcctggctcagatcaaggacatcattgagaagggcaagctggagaag
tacgttgcccgcgtgcagcgtctgctggatcaggaagaggacatcacgtcgctggacgtg
gcggccgcgctgctccgcatgacgatgaaggaagacaagcaggctgagaagagcctcgaa
gccggccgccagcaaggcgccgtgcgtccgggcttcacccgtctgttcgtgaccatgggc
aagaaagatcgggttcatccccgcgacatcgtagacttgattgccgaaaatacggccctg
accggcagcaaagtcggtgacattgccctctacgacaagtttagctttgtggaagtgcct
tcggagtttgcggaggaaatcaccaccaagctgggccgcacctcgattcagggtcgtccc
gtgtcgttcaacattgctacgccccgccaggaaggcgatgcgcagcaggaaggcaacacc
cgcggccccggcggatttggtggcggcgaagatcgtccgcgccgcagcggtggctttggc
ggcgagcgtcgcgaaggcggcttcggtggcaaccggggcggttcgtacggtgagcgtcgc
gaaggtggcttcaaccgcggtggcggctcgtttggcggcaaccgcgaaggtggctaccgc
ggcggcaacagcggtggtagctcctacggcggtggctacaaaggcaaccgtgacggtggc
agctcctacggtggcggctacaaaggcaagcgcgacaacgacggtggcggcttccgtggc
ggcaaccgcagcgaaggtccggctccccgtccgcgtcaggacttcgacgaataa
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