Hymenobacter cellulosilyticus: MUN79_22915
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Entry
MUN79_22915 CDS
T09398
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
hcu
Hymenobacter cellulosilyticus
Brite
KEGG Orthology (KO) [BR:
hcu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcu03016
]
MUN79_22915
Enzymes [BR:
hcu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
MUN79_22915
Transfer RNA biogenesis [BR:
hcu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MUN79_22915
Prokaryotic type
tRNA splicing ligases
MUN79_22915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
UOQ71439
UniProt:
A0A8T9Q7F7
LinkDB
All DBs
Position
complement(4645261..4646277)
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AA seq
338 aa
AA seq
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MLATDNAVIPYAVGVDIGCRMALSVFALPPKFLSQRVQELQKLLLDNTRFGNRTGFDRGK
KLGHEVLESDTFQAVPFLRNKQATAAEQIGTSGSGNHFVEFGVVDITDPTNEMGLAVGQY
VGLLSHSGSRGLGASVANHYTKLAMENCQLPNEAKHLAWLGLDSELGQEYWAAMTLAGDF
ASACHHQIHHRLAKALGERPLAKVENHHNFAWKERMADGREVIVHRKGATPAGRGVLGII
PGSMTAPGFIVRGRGVAESLGSASHGAGRLMSRTRAKQELGEAQVRQYLRDHDVVLQGGG
VDEAPMAYKDIHAVMQSQQELVDVLGSFTPKIVRMDGA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgctggctactgataatgccgtgattccctacgccgtgggcgtcgacatcgggtgccgc
atggcgctgtcggtgtttgctttgccgcccaagtttctgagccagcgggtgcaggaattg
cagaaactgctgctcgacaacacccgcttcggcaaccgcaccggcttcgaccggggcaag
aagctaggccacgaagtgctggaaagtgacaccttccaagccgtgcccttcctgcgcaac
aagcaggctacggccgccgagcaaatcggcacctcgggttccggcaaccacttcgtcgag
ttcggcgtggtcgacatcaccgaccccaccaacgaaatgggtttggccgtggggcagtac
gtgggtctgctcagccactccggctcccgcggcctgggcgcttcggttgccaaccactac
accaagttggccatggaaaactgccagctgcccaatgaggccaagcacctagcctggctg
ggccttgatagcgagttgggccaggaatactgggccgccatgaccctggccggcgacttt
gcctcggcctgccaccaccagattcaccaccgcctggccaaagccctgggcgagcggccg
ttggcgaaagtggaaaaccaccacaacttcgcctggaaagaacgaatggccgatggccgt
gaggttatcgtgcaccgcaagggcgctacgccggccggccggggcgtgctgggcatcatt
cccggctccatgacggcccccggctttatcgtgcgcggccggggcgtggccgagtccctg
ggctcggcttcccacggcgcgggccggcttatgtcgcgcacccgggccaagcaggagctc
ggtgaagcccaggtacgccagtacctcagagaccacgacgtggtgctgcagggtggggga
gtggacgaggcgcccatggcctataaggacatccacgccgtgatgcaaagccagcaggag
ctggtggatgtgctcggctccttcacgcccaaaatcgtgcgtatggacggcgcgtaa
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