Heliorestis convoluta: FTV88_2116
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Entry
FTV88_2116 CDS
T06277
Symbol
polC
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
hcv
Heliorestis convoluta
Pathway
hcv03030
DNA replication
hcv03430
Mismatch repair
hcv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FTV88_2116 (polC)
03430 Mismatch repair
FTV88_2116 (polC)
03440 Homologous recombination
FTV88_2116 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcv03032
]
FTV88_2116 (polC)
03400 DNA repair and recombination proteins [BR:
hcv03400
]
FTV88_2116 (polC)
Enzymes [BR:
hcv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FTV88_2116 (polC)
DNA replication proteins [BR:
hcv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FTV88_2116 (polC)
DNA repair and recombination proteins [BR:
hcv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FTV88_2116 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
DNA_pol3_a_NII
tRNA_anti-codon
BamHI
HHH_3
DUF655
DUF1980_C
T2SSK
Motif
Other DBs
NCBI-ProteinID:
QGG48214
UniProt:
A0A5Q2MZ15
LinkDB
All DBs
Position
2024756..2028436
Genome browser
AA seq
1226 aa
AA seq
DB search
MSQPSNVIINNQRYDNKVFRIQQFLINQRGQEALLYLQATGPWQEEDLLQWKEKVAAILP
ECNCLHLTIQCKIATIEELLQEYWSCWIHLATPDQPLLRSTLQALKGTVEGNRIIFKVER
TKIDLLKSRQCVHSLVQQAEQVFGLSINISLEEVENLCDDSYLQNREEEERRLFLEACKS
QSADEKVKESKDKEENKKSNQNQEIYGKKIDTSMVTPIKDIEDEERSVVIAGRIFGLETR
EMKSGRRLITFHITDLSDAITVKVFEGEKEDLLESGELKEHRWVKVRGSVQFDKYQQELA
LLARDINKAEEPVSRFDNAPIKRVELHAHTKMSSMDAVLSAKDLIARAAAWGHKAIAITD
HGVVQAFPEAADAGKKHNIKVIYGVEAYLVDKAPATGEKVKSYHIILLVRNKTGLKNLYQ
LITKSHLQYFHRRPRIPRDLLEEYRDGLLLGSACEAGELYQALLQKASPEKIEEIVNFYD
YLEIQPIGNNRFLLRKGHVQSENELQSINEHIVGLGQKAGKLVVATCDVHFLEPIDEYYR
RILMAGKGFDDADDQAPLYFRTTEEMLEEFSYLGKDRAHEVVVANPGQIADQIEMLQPIP
DDFFPPIIEGAEEQIRQMTEDCAATLYGNPLPDIVQKRVDKELNSIISNGFAVLYLISQK
LVKKSNDDGYLVGSRGSVGSSLVATFTGITEVNPLPPHYRCSACKFSEFFTDGTIGCGAD
LPDRNCPTCGKELEKDGHDIPFETFLGFEGDKVPDIDLNFSGEYQPRAHKFTEELFGRDY
VFRAGTISTLAERTAFGFVKNYLDEKKMHCRNAEIARLVGGCTGVKRTTGQHPGGLMVVP
KNADIHDFTPLQRPADDVKSETITTHFDYHSISSRLVKLDILGHDDPTVIKMLEDLTGVD
ARKIPLDEPKTMSLFSTTEALGVTAEQIRSNVGTYGIPEFGTKFVRQMLEDTRPKSFSEL
VRISGFSHGTDVWLNNAQDLIKSGTCQVNEAISTRDDIMVYLIYQGLPPKKAFSIMESVR
KGKGLKPEDEELMRHHQVPSWYIESCKKIKYMFPKAHAVAYVTMAFRIAYFKVYYPEAFY
ASFFTVRADEFDGDIICNGVHPVRMKIEEIEKKGHDATQKEKNLMTILELALEMYERGIA
MQKVTLLRSHSTRFLIEREGLLPPFAALAGLGEAAAQNIMTAREEVPFTSIEDIRIRARV
SKTVIEVLQNHGALEGLSETNQICLF
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaccttctaatgtgataataaacaatcaacgatatgataataaagtttttcgt
atccaacaatttcttattaatcaaaggggtcaagaagctcttctttacctccaagcaaca
gggccctggcaggaagaagatttgcttcaatggaaagagaaagtagcagcgattttgccg
gaatgcaattgtcttcaccttactatacaatgcaaaattgctacgattgaagagttattg
caagagtattggtcttgttggattcaccttgctacaccagaccaacctttgcttcgctcg
accttacaagcactaaaaggcactgtcgagggaaaccgaattattttcaaagtagaacga
acgaaaatagatttactcaaaagtcgccaatgtgtacattccttggttcaacaggctgag
caagtttttggactttccataaatatttcacttgaagaagtagaaaatctatgtgatgat
agctatctgcaaaatagagaagaagaagaaagaagattgtttttagaagcctgtaaaagc
caaagtgctgatgaaaaggttaaagaaagtaaagataaagaagaaaacaagaaaagcaat
caaaaccaagaaatatacggtaaaaaaattgacacttctatggtaactcctattaaagac
atagaagatgaagaacgatctgttgttatagcaggaagaatatttggcctagaaactcga
gaaatgaaatcaggtcgtcgtcttattacttttcatataacagatctctccgatgcaatt
actgtaaaagtttttgaaggggagaaagaggatcttttggaaagcggagagttgaaagag
catcgctgggtaaaagtacgaggctctgttcaattcgataaatatcaacaagaactagcc
ctgttagcacgagatattaacaaggcggaagaaccagtatcacgatttgataatgcaccg
ataaaaagagtagagctacacgcccatacaaaaatgagctctatggatgcagtcctttca
gccaaagatttaatcgctcgagcagcagcctgggggcataaagcgattgcaattacagat
cacggtgtcgtacaagcttttcctgaagcagccgatgccgggaaaaaacataatattaaa
gtaatctatggcgtagaagcatatctcgttgataaagcgcccgcaacaggcgaaaaagta
aaatcctatcacatcattttgcttgttcgtaataagacaggcttaaaaaatctatatcaa
ttaattacaaagtctcatctccaatattttcatcgccgaccccgaattcctcgagacctc
ttagaagaatatcgagatggattgcttctcggaagtgcttgtgaagctggagaactttac
caagcccttcttcagaaagcatcgccagaaaaaatcgaagaaatcgtaaacttctacgat
tacttagagatacaaccgataggtaacaatcgatttctattacgaaaaggacacgttcaa
tcagaaaatgaactacaaagcatcaacgaacatattgtaggattgggacaaaaagccgga
aaactcgtagtagctacttgtgatgtacactttctagaaccaattgatgaatactatcgt
cgcattctaatggctgggaaaggctttgatgatgctgacgaccaggcaccgctttacttt
cgaacgacagaagagatgcttgaagaattttcttatcttggcaaagatagagcccatgaa
gtggtcgttgctaatccaggacagattgctgaccagattgagatgctgcaaccaattcct
gacgacttttttccacccatcatcgaaggggcggaagagcagattcggcagatgacggaa
gattgtgccgccacactgtatggtaatcctttaccggacattgtacaaaaacgagttgat
aaagaactgaactctattatctccaatggctttgctgttctgtacctaatatcacaaaaa
ctcgtcaaaaaatcaaatgacgatggctatcttgtcggttcaagaggctccgttggctcg
tccttggtagcaacttttacagggattacagaagttaaccctttgccacctcattatcgc
tgtagtgcttgtaaattctctgagttctttacggatggaacaattggttgtggtgccgac
ttaccggatcggaattgccctacctgcggcaaagaattagaaaaagatggacatgatatc
ccctttgaaacatttctaggctttgaaggtgataaagtacctgacatcgatttgaacttt
tccggtgaataccaacctagagctcataagtttacagaagaactttttggacgagactac
gtctttcgggcaggcaccatttctacgctcgcagaaagaacggccttcggctttgtcaag
aactacttagatgaaaagaaaatgcactgtcgcaatgctgaaattgcgcgccttgtcggt
ggctgcacaggtgtaaaaagaacaacaggtcaacaccctggcggattaatggttgtgccc
aaaaatgctgatattcatgattttacacccttgcaacgaccggcagatgatgtcaaatcg
gaaacaattacgacccactttgattaccactctatatcgagtcgccttgttaagctagac
attttaggccacgacgacccgactgtgatcaagatgttagaagacttaacaggtgtagat
gctcgtaaaattccactggatgaacccaaaaccatgtcactattctctactacagaagcc
ttaggcgtaacagcagaacaaatacgatcgaacgtaggcacctacggtatccctgaattt
ggaactaaatttgttcgacaaatgctagaagatacaaggccaaaatcattttctgaactg
gtgcgtatttccggcttttctcatggtacagacgtctggttaaacaacgcccaggatttg
atcaaaagcggtacttgtcaagttaatgaagccatctcaacacgtgatgacatcatggtg
tacttaatctatcaaggtcttccaccgaaaaaagctttctccattatggaaagcgtacgt
aaaggaaaaggccttaagccagaagatgaggaattgatgcgtcatcatcaagttccgtca
tggtatattgaatcttgcaaaaagatcaaatacatgtttcccaaagcacatgctgtcgct
tacgtgacgatggcctttcgtattgcctatttcaaggtctattatcctgaagccttttac
gcttcttttttcacagttagagccgatgaatttgatggtgatattatctgcaacggcgtt
catcctgtgcgcatgaaaattgaagaaatagagaaaaaaggacacgatgctactcaaaaa
gagaaaaacctgatgaccattttagaattggcattagagatgtacgaaagaggcatcgcc
atgcaaaaagtgactttgctacgctcccattctacaagattccttatagagcgggagggc
ttactgccaccttttgcagccttagcaggtcttggtgaggcggccgctcaaaatattatg
acggctcgagaagaagtaccttttacatctattgaagacatacgcattcgagctagagta
agtaaaacggttatagaagtattacagaatcacggtgctttagaaggtctatcagaaacg
aatcaaatctgtctcttctaa
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integrated database retrieval system
