Heliorestis convoluta: FTV88_2129
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Entry
FTV88_2129 CDS
T06277
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hcv
Heliorestis convoluta
Pathway
hcv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FTV88_2129 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcv03019
]
FTV88_2129 (pnp)
03016 Transfer RNA biogenesis [BR:
hcv03016
]
FTV88_2129 (pnp)
Enzymes [BR:
hcv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FTV88_2129 (pnp)
Messenger RNA biogenesis [BR:
hcv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FTV88_2129 (pnp)
Transfer RNA biogenesis [BR:
hcv03016
]
Prokaryotic type
tRNA degradation factors
FTV88_2129 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
DUF5481
S1_2
CsrA
Motif
Other DBs
NCBI-ProteinID:
QGG48227
UniProt:
A0A5Q2MZW7
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All DBs
Position
2040319..2042424
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AA seq
701 aa
AA seq
DB search
MQIFTMELAGRTLTIETGRVAKQANGSVLATYGDTVVLVTATASKEPRPGIDFFPLTVDY
EERLYAVGKIPGGFIKREGRPTEKAILSSRLIDRPIRPLFPKGYRNDVQVVATVMSVDQE
CQPDIVAMIGASCALSLSDIPFEGPIGGVTVGRVDGEFVINPGVEATEKSDIHLVVAGTK
DAVMMVEAASHEVPEEIMLEAIMYGHQEIQRIVEFQEKMVKEVGKDKREVTLQKVAEDID
SAVRSFVGSKLAQAIRNSDKLSREEDIQAVKDETMAALIQQYPEQEKDIQEVLYTIVKET
VRAMITVDKMRPDGRKPDEIRPITVEVGILPRTHGSGLFTRGQTQVLNVCTLGTIGDSQI
LDGLGLEESKRYLHHYNFPAFSVGEARPMRGPGRREIGHGALAERALVPVLPSEDEFPYT
IRLVSEVLESNGSSSMASVCGSTLSMMNAGVPIKAPVAGIAMGLIKDSNDYAILSDIQGM
EDALGDMDFKVAGTTKGVTALQMDIKIQGVNREILTEALAQAYKGRLHILDKMTEVIAKP
SETMSPYAPRIIAFAIDADKIREVIGPGGKTINKIIADTGVKIDIEDDGRIFIASTDEES
AQKALRIIQDLVAEVEVGQIYTGKVTRIMTFGAFVELLPGKEGLVHISQLANERVGKVED
VVKIGDEITVKVIEIDKQGRVNLSRKELLKPKVPTGEPQLG
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaatctttacaatggaattggctgggcgcacattaaccatagaaacaggtcgtgtt
gccaaacaagccaacggatctgtactggccacatacggtgatacggttgttctagtaaca
gcaacagcttcaaaagaaccaagaccaggcattgatttctttcctttaacggttgactat
gaagaaaggctttatgctgtaggcaaaattcctggtggttttatcaaacgagaagggcga
cctacagaaaaagccattttatcttcacgcctcattgataggccgattcgacctttattc
ccaaaaggatatcgaaatgatgtacaagtggttgctactgtaatgtctgtggaccaagaa
tgtcaacctgatatcgtggccatgattggtgcttcttgcgctctgtccctctctgacatt
ccttttgaaggaccgattggtggtgtcactgtaggtagagtggatggggaatttgtaatt
aacccaggggtagaagcaacggagaaaagtgatattcacttggtcgtagctggaacgaaa
gacgctgttatgatggtagaagcagcatctcatgaagtacctgaagagattatgctggaa
gcgattatgtatgggcatcaggaaattcaacgaattgtcgaattccaagaaaagatggtt
aaagaagtaggcaaagataaaagagaagttacactgcagaaagttgctgaagatatcgat
agtgctgtccgtagcttcgtaggcagtaaactggcgcaggccattcgtaattctgacaag
ctttctcgagaagaagatatacaagcagtcaaagatgaaacaatggcagcactgattcaa
caataccctgaacaagaaaaagatattcaagaagtactttacacaattgtaaaagaaacg
gttcgtgccatgattacagtagataagatgcgtccagatggccgcaagcccgatgagatt
cgtcctatcactgtagaggttggcatcttacctagaacacacggtagcggcttatttaca
agaggacaaacgcaagtcttgaacgtttgtacccttggcacgataggcgactctcagatc
ttagatggactaggtctagaagaatcgaaacgctatctccatcactacaatttcccagct
tttagtgttggtgaagctcgaccgatgagaggccctggtcgtcgtgagattggtcatggc
gctttggctgaaagagcgcttgttcctgttttgccttcagaagatgagtttccctatacc
attcgattggtttcagaagttctagaatccaatggttcttcttcgatggccagcgtctgt
ggttccactctttctatgatgaatgctggtgtacccattaaagctcctgtcgcagggata
gccatgggactgatcaaagatagcaatgattatgctatcttatcagatattcagggcatg
gaagatgctttgggtgacatggattttaaagtagcgggaacaacaaaaggtgttacagcc
ttacaaatggacattaagattcaaggtgttaatcgagagattttaacagaagcactggca
caagcttataaaggtcgattgcacattcttgataaaatgacggaagtaatagcgaaacct
tccgaaacaatgtctccttatgcacctcgcatcattgcttttgccattgacgctgacaag
attcgcgaagtcattggtcctggtggaaaaacaatcaataagatcattgctgacacaggc
gtaaagattgatattgaagacgatggacgcatttttattgcttctaccgacgaagaaagt
gctcaaaaagcattgcgcattattcaagatctcgtagcagaagttgaagttggtcagatt
tatacaggaaaagttacccgcatcatgacttttggcgcttttgtagagcttttacctggt
aaagaaggacttgttcatattagtcaactggccaatgagcgcgttggaaaagtagaagat
gttgtcaagattggtgacgaaatcacagtaaaagtcattgaaatcgataagcaaggccgt
gttaacctatcaagaaaagaacttctcaaaccgaaagtaccaactggcgaacctcaactt
ggataa
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