Hymenobacter canadensis: O3303_03130
Help
Entry
O3303_03130 CDS
T09156
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
hcw
Hymenobacter canadensis
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcw02000
]
O3303_03130
Transporters [BR:
hcw02000
]
Other transporters
Pores ion channels [TC:
1
]
O3303_03130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
Plug
CarboxypepD_reg
PEGA
EMC7_beta-sandw
Motif
Other DBs
NCBI-ProteinID:
WBA42558
LinkDB
All DBs
Position
complement(729559..732588)
Genome browser
AA seq
1009 aa
AA seq
DB search
MKQPYLAKLLFLLLFVCAGFTGAFAQTGSVSGRVVDEKNGGLPGVTVIIEGTTLGNSTNS
DGTYSIQNVPAGPRTLVVSFVGYTTGRIPVTVTAGQNTAVASTTLNENTTLLNEAVVVGY
GTVRKQDVTGSVTAVTSRDFVKGQITTPEQLIAGKVAGVQITGSGGAPGAGSTIRIRGGS
SLSATNDPLIVIDGVPVNGGEVSGTGNALNLINPNDIETFTVLKDASATAIYGSRASNGV
IIITTKKGISGEKTRVNVSSQFSLAYNPKKFDVLSGDEFRALVNQQGTEDQKALLGTANT
DWQDAIFRTAYTQDYNASITGNAGAVPYRVSLGHLNQDGVIKTNNFKRNSVSVGINPTLF
DGHLRVDANIKGSWVDNRFVENGIVGNAVFFNPTQPILQAGSPFDGYFEYYTTSPTGVIG
RVGQSTANPLARLNQRRDRSTVKRSIGNLALDYKLHFLPDLRANINVGYDITRSNGNTFV
AGNNAISEFNQNGPGGIDNSYAQDRDNKLLETYLNYTKDFGTAGRLELLGGYSYQDFLRN
APFFFGRRPNGDLINPAQLEAFADKSQYTLISYYGRLNYNFNDRYLFTATLRNDISSRFS
EENRSGLFPAAALAWRIKGENFLANSTFLSDLKLRVGYGITGQQDVGGVNDYPALARYIN
GESTVSYPVGGVYTIPVRRAPSDPNIKWEETTTYNAGLDYGFIDGRLTGTVDVYLRKTKD
LINEIEVPAGSNASNKLFTNIGSLENKGVELGLVGVVAQSTDFNWSLTANATFNRNEITK
LTLNDNPNSLGSRVGGIGGGTGSTIQTNSVGFQARSFFVYKQKYDASGNPIQPNGTTVTD
LQAFEDLDANGVINEQDLYRYKAPAPRTILGLGSNMSYRKVNFAFTMRANLGNYAYNNIA
SSSTSTNIFPSQPFLNNTTRFYEQTRAIGSGTNYRLSDYYVQDASFLRMDNITLGYTLGE
ESNINISLAVQNAFVITKYDGIDPEIFDGIDNNLYPRARTYTIGVNFGF
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaccctacctggcgaaactcttgtttctgctactgttcgtttgtgccgggttt
actggtgcattcgcgcagactggttccgtgagtggccgtgtcgtagacgagaagaacggt
ggcctgcccggcgtaaccgtaatcatcgaaggcaccacgctcggcaactccactaactcg
gacggtacgtactccattcagaacgtaccagccggcccgcgcacgctggttgtctcgttt
gtaggctacaccaccggccgcattccggtaaccgtaacggccggccagaacacggccgta
gccagcacgaccctcaacgaaaataccacgctgctcaacgaagcagtagtagtaggctac
ggcaccgtacgcaagcaggacgtaacgggctcggtaacggccgttacctcgcgtgacttc
gtgaagggccagatcactacgcctgagcagctcatcgccggcaaagtggcgggtgtgcag
atcacgggcagcggcggcgctcctggcgccggcagcaccatccgtatccgcggcggctct
tcgctgtcggccaccaacgacccactcatcgtaattgatggggtaccggtgaacggcggg
gaagtgagcggcacgggcaatgccctgaacctgatcaaccccaacgacattgagaccttc
acggtgctcaaggacgcttcggccacggccatctacggctcgcgcgcttccaacggcgtt
atcatcatcaccaccaaaaagggcatcagcggcgagaaaacccgcgtaaatgtcagctcg
cagttctcgttggcctacaaccccaagaagttcgacgtgctgtcgggcgacgagttccgg
gcgctggtgaaccagcagggcaccgaagaccagaaggcgcttctgggcactgccaacacc
gactggcaggatgccattttccgcaccgcctacacgcaggattataacgccagcatcacc
ggcaacgccggtgccgtaccgtaccgcgtatcgctgggccacctcaaccaggatggcgtt
atcaagaccaataacttcaagcgtaacagcgtttcggtgggtatcaaccctaccctgttc
gacggccacctgcgcgttgatgccaacatcaaaggctcctgggtggacaaccgcttcgtg
gagaacggcattgtcggcaacgcggtgttcttcaaccccacgcagcctatcctgcaggcc
ggctcgcctttcgacggctacttcgagtactacaccaccagccccaccggcgttattggc
cgtgtaggccagtcgacggccaaccccctggcccgcctgaaccagcgccgcgaccggagc
accgtgaagcggagcatcggtaacctggccctcgattacaaactgcacttcctgcccgac
ctccgcgccaacatcaacgtcggctacgacatcacgcgcagcaacggcaacacgtttgta
gccggcaacaacgccatttcggagttcaaccagaacggcccgggcggtatcgacaacagc
tacgctcaggaccgcgacaacaagctgctcgaaacctacctcaactacaccaaggacttc
ggcacggccggccgtttggaactgttggggggctactcctaccaggatttcctgcgcaac
gcgccgttcttcttcggccgccgtcccaacggcgacctgatcaacccagcccagctggaa
gccttcgccgacaagtcgcagtacacgctcatctcttactacggccgtctgaactacaat
ttcaacgaccggtacctgttcacggccacgctgcggaacgatatttcgtcgcgcttctct
gaggaaaaccgctcgggtctattcccggctgcggctctggcttggcgtatcaaaggcgag
aatttcctggccaactccaccttcctttccgatctgaaactgcgcgtaggctacggcatc
accggccagcaggacgttggcggagttaatgactaccccgctctggcgcgctacatcaac
ggtgaaagcacagtttcatatccggttggcggcgtatacaccattccggtacgccgggct
ccgagcgacccgaacatcaagtgggaagaaaccaccacctacaacgctggtctggactat
ggcttcattgatggccgcctgacgggtaccgtggacgtgtacctgcgcaaaaccaaagat
ctgatcaacgagattgaagtgccagctggctcgaacgcctctaacaaactgttcaccaac
atcggctctttggagaacaaaggtgtagagctgggtctggtgggcgtagttgcccaatct
actgacttcaactggagcctgacggccaacgccaccttcaaccgcaacgaaatcacgaag
ctcacgctcaacgacaacccgaactctttgggttcgcgcgttggtggcatcggtggcggt
acgggttctaccatccaaaccaactctgtgggcttccaggcccgctcgttcttcgtgtac
aagcagaagtacgacgccagcggcaaccccatccagcctaacggcacgacggttacggac
ctgcaggccttcgaagatctggacgccaatggtgtcatcaacgagcaggacctgtatcgt
tataaggcaccggcacccagaaccattctgggcctgggctcgaacatgagctaccgcaaa
gtgaacttcgctttcacgatgcgcgccaacctgggcaactacgcctacaacaacattgcg
tccagctccaccagcaccaacatcttcccttcccagcctttcctgaacaacaccacccgc
ttctatgagcagacgcgggccatcggttcaggcaccaactaccgcctctccgactactac
gtgcaggacgcttcgttcctgcgcatggacaacatcacgctgggctacaccctgggtgaa
gagtcgaacattaatatctcgctggctgttcagaatgcattcgtaatcaccaagtatgat
ggcattgaccccgagatttttgatggcatcgacaacaatctgtacccccgggcccgcacg
tataccatcggtgtaaactttggcttctaa
DBGET
integrated database retrieval system
