Hymenobacter canadensis: O3303_03205
Help
Entry
O3303_03205 CDS
T09156
Name
(GenBank) T9SS type A sorting domain-containing protein
Organism
hcw
Hymenobacter canadensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIDO
Por_Secre_tail
G8
Motif
Other DBs
NCBI-ProteinID:
WBA42573
UniProt:
A0ABY7LQ74
LinkDB
All DBs
Position
complement(748436..751483)
Genome browser
AA seq
1015 aa
AA seq
DB search
MRTFPLVLFYRWMLALCLAGTLGQQAAAQTATSRAIDPSLLDPQYDLRKQRLIRPGTQAR
SSARPVLGSSAAPQLPACFEPLDSVSAPAAGGYTNLPRNDDGSSSLIPLGFTFTLFGTPY
TGVYINTNGNLSFGASVSQFSANGFPIVTPMVAGFWADVDTRPASSGSIWYKLYPDRLVV
TWNRVGYFSGKTDKKNTFQIVIRANSAGVTTDDVTFAYGDMQWTTGDASNGVDGFGGSLA
TVGANRGTNGDFIQTGRFNLNNAIRTDNVSPSGVNWLDEQCISYRVFANGNLPPSATNLP
LNNTITVNQGQTVSIAPQFSGPEAGQAVTLAVNTNGLCNVTSSVSAGINPVLSLSVTGAP
CNVGTNTISIVATDNGTPVASRQFNITVIVNPPATANGQWNGSVSTVYTDPANWANSTLP
TATTDVTIPAAAVRMPVLSSAASANSFTIASGASLTVASGGTLTLNGTFLNNGSCIGAGA
LVLGGPAQQSLGGSNLISMAGLTVGPAGAQLTGPLAVSRLLTLNGNLATNSQTLTLLSDA
SGTAMVVNNGSAVVTGAATMQRYISPSQNAGAGYRHYSAPVSNTTVADLGAANFTPVVNP
AYNTAPVPAAVTPFPTVFGYDESRVNATAASFDQGWFSPATLSAAMTPGVGYTVNLPATA
TVDFVGTLTSGTVARTGLTRGTQPTSGWHLLGNPYPAPIDWTLATTGLSGLDNAVYVFKS
SGTYAGSYSSFVNGVGDARFIASGQGFFVRTTTAGTPGSLSLSNAARLTTYQNPDFNRPS
ALETRPLLQLDLVNGTQRDAATVYFEQGATSAFDAAFDAYKLTTGNVASLSLPVGSEQLS
ISGLPALSRADVLIPLQVRVPVSGSYQLEAAQLLNLPAGLYAYLRDAETGTSLDLAQQPV
YAFRQAADATGPRFSLLLTTNRILASAATLAGQQIQLYPNPAHTTATLVLPATLRTVPGT
AVLYNALGQAVRSYSWAPGTAGTPQMLSVSGLAQGVYTLRLSTLVGPATKRLVIE
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacgtttcctctggtgttgttttatcgatggatgctggcactgtgcctggctgga
acgctcgggcagcaggctgctgctcaaacagccacgtcccgagccatcgacccttccctg
ctcgatccgcagtacgatttgcgcaagcaacgcctgatcaggcccggcacccaggcccgg
tcttccgcccgcccggtcctcggcagcagtgccgcgccgcagctgccggcgtgcttcgag
ccgctggattctgtgtcggctccggccgccggcggctataccaacctgccacgcaacgac
gacggttcgtccagcctgattccgctgggcttcacgttcacgctgttcggtacgccctac
actggcgtatacatcaacaccaacggcaacctgtcgtttggcgcttcagtgtcgcagttt
tccgccaatggcttcccgattgtcacgcccatggtggcggggttctgggccgatgtggac
acgcgccccgccagtagcggcagcatctggtacaaactctaccccgaccgattggtggtc
acctggaaccgcgtaggctacttcagcggcaaaacagataagaaaaacaccttccagatc
gtcattcgggccaactcggcgggtgtcacgacggatgacgtgacgtttgcctatggcgac
atgcagtggaccaccggcgacgcctccaacggggtagatggcttcggcggctcgctggcc
acggtgggcgctaaccgcggcaccaatggcgactttatccagacgggccgcttcaacctt
aacaacgctatccgcaccgacaacgtgagccccagcggggtcaactggctggatgagcaa
tgcatctcctaccgcgttttcgcgaacggcaacctgccgccttccgccaccaatctgccg
ctcaacaataccattaccgtcaaccagggccagacggtgagcattgcgccgcagttttcg
ggtccagaagccggccaagccgtgacactggccgtgaacaccaacgggctgtgcaacgtc
acgtccagcgttagcgcgggcatcaacccggtgctgagcctgagtgtaaccggggctccg
tgcaacgttggcaccaacaccatcagcattgtggccaccgacaacggcacgccggtggca
agccggcagtttaatatcaccgtcatcgtaaatccgcccgccacggccaacggccagtgg
aacggcagcgtgagcaccgtatatactgacccggccaactgggctaacagcacgttaccc
acggccaccaccgatgttacgattccggctgcagccgtgcggatgccggtgctgagcagc
gccgccagcgccaacagcttcaccattgccagcggggccagcctcacggtagcaagcggc
ggcactcttacgctcaatggcacattcctgaacaatggcagctgcatcggggcgggcgcc
ctcgtcctgggcggccccgcccagcaaagcctgggcggcagcaacctgatcagcatggcc
ggcctgaccgttggcccggccggcgcccagctcaccgggccgctggccgtgagccgcctg
ctgaccctgaatggcaacctggctaccaatagtcagacgctaacgttgctttcggatgct
tccggcacggccatggtagtaaacaacggctccgccgtagtaaccggggccgccacgatg
cagcgctacatcagccccagccagaatgccggggccggctaccgccactacagtgcgccc
gtcagcaataccacagtagctgacctgggcgcggccaactttacaccggttgtgaatccg
gcctacaatacggccccggtgccggccgccgttacgcctttccccacggtttttggctac
gatgaaagccgggtgaatgccacagccgccagcttcgaccagggctggttttcgccggcg
accctatcggcggctatgacgccgggtgtgggttacaccgtgaatctaccggccaccgcc
accgtcgattttgtgggtacgctcacgagcgggaccgtggcgcgcaccggcctaacccgc
ggcacgcagcctacctcgggctggcacctgctgggcaacccctatcccgcccccatcgac
tggaccctggccacgaccggcctctcgggccttgataacgcggtgtacgtgttcaagtcg
tcggggacgtatgcgggcagctacagcagcttcgtgaatggtgtgggcgacgcccgcttc
attgcgtcgggtcagggcttctttgtgcgaaccaccacggccggcacgccgggcagcctg
tcgctcagcaacgcagcccgcctcaccacctaccaaaacccggacttcaaccgcccttcg
gctctggaaacccgcccgctgcttcagctcgatctggtcaacggtactcagcgcgatgct
gccaccgtctattttgagcagggcgctacatctgcctttgatgccgccttcgacgcctac
aaactgaccaccggcaacgtggccagcctatcgttgcccgtgggctccgagcagttgagc
atcagcgggctgcccgccctcagccgcgccgacgtgttgattccgttgcaggtgcgcgta
ccggtatcgggctcctaccaactggaagccgcacagctgctaaacctgccggccgggctc
tacgcctacctgcgcgacgcagaaaccggcaccagcctcgatctggcccagcagccggta
tacgccttccgccaagccgcagacgccaccggcccgcggttttcgctgctcctgaccact
aaccgcatactggccagcgcggccacgctggccggccagcagattcagctgtatcccaac
ccggcgcataccacagccaccctggttctgcctgctactttacgcaccgtgccgggcacg
gcagtgctgtacaatgcgctggggcaggcggttcgcagctattcgtgggcaccaggcacg
gcggggacgccacagatgctgtcggtgagcgggctggcgcagggcgtttacacgttacga
ttgtccactctcgttggcccagccaccaaacgtttggtaatagagtag
DBGET
integrated database retrieval system
