Hymenobacter canadensis: O3303_03800
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Entry
O3303_03800 CDS
T09156
Name
(GenBank) HAMP domain-containing protein
Organism
hcw
Hymenobacter canadensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP_2
HAMP
MCPsignal
ATG17_like
GatB_Yqey
COG3_N
Motif
Other DBs
NCBI-ProteinID:
WBA42686
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Position
896408..900832
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AA seq
1474 aa
AA seq
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MASGKTPSPARRSAASAPADSSSAPAVTAVAAAKPANGKLAAVGDAARRSGSAKGSNLRG
TGTLENTDYVNEQLNRVLYALDAFKKGDVSVRLTKQNDDIFAEIAEAYNSMVEMIGGVGG
EVSRISKVAGVEGNLKARASAENAAGFWRDMINNINGLVDSIAVPVLEVGKVLKNISKGN
LDETFQIPVSGDFKVMAETINKTIDNLNLFAGEVTRVAQEVGTEGKLGGQASVPNVGGIW
KDLTDNVNYMASNLTSQVRDIANVATAVAKGDLTQKITVDVKGELLQLKQNLNQMVDSLN
LFAGEVTRVAQEVGTEGKLGGQALVPNVSGVWKDLTDNVNNMASNLTLQVRDIANVATAV
AKGDLSQKITVDVKGELLQLKQNLNQMVDSLNLFAGEVTRVALEVGTEGKLGGQADVPNV
AGVWKELTDNVNNMASNLTLQVRDIANVATAVAKGDLSQKITVDVKGELLQLKQNLNQMV
DSLNLFAGEVTRVALEVGTEGKLGGQALVPNVAGVWKELTDNVNYMASNLTLQVRDIANV
ATAVARGDLSQKMAVDVKGEILELKNILNQMVDSLNIFGDEVTRVAREVGTEGKLGGQAS
VPRVSGTWKDLTDNVNYMASNLTSQVRDIANVASAVAKGDLTQKMTVDVKGEILDLKNIL
NQMVDSLNIFAGEVTRVAREVGTEGILGGQASVPNVSGTWKDLTDNVNTMASNLTSQVRD
IANVATAVAKGDLSQKVTVNVRGELLQLKENLNQMVDSLNTFGDEVTRVAREVGTEGKLG
GQADVPNVRGTWKDLTDNVNFMAASLTSQVRDIANVTTAVARGDLSQKVSVDVKGELLDL
KDNINRMVDSLNIFAGEVTRVAQEVGTEGKLGGQADVPNVSGVWKDLTDNVNTMATNLTT
QVRGIGKVVTGVSQGDLTQKLTLEAKGEVAELADTINRMVDDLNRLAQEVSRVAKVAGVE
GKLTERATVGGVSGSWKEIVDTLNDLLESIASPVLEVSRVVRAISEGDLTQQVEIQTAGD
IKSMADALNLAVDNLNDLLAEINESSQVVGTSSEDMAAKGQEMSRVTVDVALAMQQMAEG
AQNQALKTDQAFKLIEEIMQATKETAGKADVGIKAAILGEQTSQLGLKTVAEVVKNMEEI
SAAAAQTAKTIEVLSARSQDISKSLSVITDIASQTNLLALNAAIEAARAGEAGRGFAVVA
EEIRKLAEGSRRSASEIGTLVDDVKKDTTSAATAISTMEGRVLKGKNATFEASSAFKNIA
TSSGETLRTSRDILTATEIQKTSIGDVVKYVEEVVAIAEQTASGTQQVAGTAKQLSSSMH
ELTVSSQRLTDIADDLQLGLSNFQLLEEIEPEPEPEPVRHRSRRMAHQPASATPERDRAT
VRRADAATDAAHAQAVANRPLTTTRRGDARATAAAPAPVRKQTNAEQAEAQRSRKASRRK
ADAAPAAAATSNGKAPAEVPAAKPARVRSRKEAK
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaggtaagacaccctctcccgcccgtcgttctgccgcttccgccccggccgac
agttcttcggctccggccgtcacggccgtagcggctgccaagcctgctaatggcaagttg
gccgccgtcggcgacgctgcccgccgcagcggtagtgccaaaggctctaacctgcgcggc
acggggacgctggaaaatactgattacgtcaacgagcagctcaaccgggtgctgtacgcc
ctcgacgccttcaagaaaggtgacgtgtcggtgcggctgaccaagcagaacgacgacatc
ttcgccgaaatagccgaggcctacaattccatggtggaaatgattggcggggtaggcggc
gaggtgtcgcgcatctccaaggtagccggggtggaaggcaacctgaaggcccgcgcttcc
gctgagaatgccgccggtttctggcgcgacatgatcaacaacatcaacgggctggttgac
agcattgccgtgccggtgttggaggtaggcaaagtgctcaagaacatcagcaagggtaac
ctcgacgaaaccttccagattccggtttccggcgacttcaaggtgatggccgaaaccatc
aacaagaccatcgataacctcaacctttttgccggcgaagtaacccgcgtggcacaggaa
gtaggcaccgaaggcaaactgggcggccaggcctcggtaccaaacgtgggcggcatctgg
aaagacctgaccgacaacgtaaactacatggcctccaacctgacttctcaggtgcgggac
attgccaacgtagccacggccgtagccaaaggcgacctgacccagaaaatcaccgtggac
gtgaagggcgaactgctacagttgaagcagaacctgaaccagatggtggactcgctcaac
ctgtttgccggcgaggtaacccgcgtggcgcaggaagtgggcaccgaaggcaagctcggc
ggccaggcactggtgccgaacgtgagcggcgtgtggaaagacctgacggacaacgtaaac
aacatggcctcgaacctgacgcttcaggtacgagacattgccaacgtagccacggccgta
gccaaaggcgacttgtcgcagaagattaccgtggacgtgaagggcgagctgctgcagctc
aagcagaacctgaaccagatggtggactcgctcaacctgttcgccggcgaggtaacccgc
gtggcattggaagtgggcaccgaaggcaagctcggcggccaggccgacgtgccaaacgtg
gccggcgtgtggaaggagctgaccgacaacgtgaacaacatggcctcgaacctgacgctt
caggtgcgggacattgccaacgtagcgacggccgtagccaaaggcgacttgtcgcagaaa
atcacggttgacgtgaagggcgagctgctgcagctcaagcagaacctgaaccagatggtg
gactcgctcaacctgtttgccggcgaggtaacccgcgtggcattggaagtgggcaccgaa
ggcaagctcggcggccaagcgcttgtgcccaacgtggccggcgtgtggaaggagctaacc
gacaacgtaaactacatggcctcgaacctgacgcttcaggtacgcgacattgccaacgta
gccacggccgtagcccgcggtgacctcagccagaaaatggccgtggatgtgaaaggcgaa
atcctggagctgaagaacattctcaaccagatggtggactcgctcaacatcttcggcgac
gaagtaacccgcgtggcccgcgaagtaggcaccgaaggcaagctcggtggccaggccagc
gtgccgcgcgtgtcgggcacctggaaagacctgaccgacaacgtaaactacatggcctcc
aacctgacctctcaggtgcgagacattgccaacgtagccagcgcggtagccaaaggcgac
ctgacccagaagatgacggtggatgtgaaaggcgagattctcgacctcaagaacatcctc
aatcagatggtggactcgctcaatatcttcgccggcgaagtaacccgcgtggcccgcgag
gtaggtaccgagggtatcctgggcggccaggcgtcggtgccgaacgtgagcggcacctgg
aaggacctgaccgacaacgtaaacacgatggcctcgaacctgacctctcaggtgcgcgac
attgccaacgtggccacggccgtagccaaaggcgacttgagccagaaagtgacggtaaac
gtgcgcggcgagctgttgcagctgaaggaaaacctcaaccagatggtggactcgctcaac
accttcggcgacgaagtaacccgcgtggcccgcgaagtaggcaccgagggcaagctcggc
ggccaagccgatgtaccgaacgtgcgcggtacttggaaagacctcaccgataacgtaaac
tttatggccgcctcgcttaccagccaggtgcgcgacattgccaacgtaaccaccgccgta
gcccgcggcgacctaagccagaaggtttcggtagatgtaaaaggcgagctgctcgacctc
aaggacaacatcaaccggatggtggactcgctcaacatcttcgccggcgaagtaacccgc
gtggcgcaggaagtgggcaccgagggcaagctcggcggccaagccgacgtgccgaacgtg
agcggcgtctggaaagacctgactgacaacgtaaacaccatggccaccaacctcaccacc
caggtgcggggcattggcaaggtggtaaccggtgtatcgcagggcgacctgacccagaag
ctaacgctggaggccaaaggcgaagtagccgagctggccgacaccatcaaccgcatggtg
gacgacctgaaccgcttggcgcaggaagttagccgcgtggccaaagtggccggcgtggaa
ggcaagctgaccgaacgcgccacggtaggcggcgtgagcggctcgtggaaggaaatcgtg
gatacgctcaacgacctgctcgaatccattgcctcgccggtactggaagtgagccgcgta
gtgcgggccatttccgaaggcgacctgacccagcaagtggaaatccagacggccggcgac
atcaagtcgatggctgacgccctgaacctggccgtggacaaccttaacgacctgctggcc
gaaatcaacgagtcgtcgcaggtggtaggcacgtcgtcggaagacatggcggcgaaagga
caggagatgagccgggtgacggttgacgtggccctggccatgcagcaaatggccgaaggg
gcccagaaccaagctctcaagaccgaccaggccttcaagctgatcgaagaaatcatgcag
gccaccaaagaaaccgccggcaaagccgatgtgggcatcaaggcggccatcctgggtgag
caaacctcgcagctcggccttaagaccgtggcggaagtggtgaaaaacatggaggaaatt
tcggcggcagcggcccagacggccaaaaccatcgaagttctgtcggcccgctcccaggac
atcagcaagtcgctgagcgtgattaccgacattgcctcgcaaaccaacctgctggccctg
aacgctgccattgaggccgctcgggccggtgaggccggccgcggctttgccgtggtagcc
gaagaaatccgcaagctggccgaaggatcccgccgctcggcctcggaaatcggcacgctg
gtagacgacgtgaaaaaggatactacctcggccgcaaccgccatcagcaccatggaaggc
cgggtactgaaaggcaagaatgccaccttcgaggccagctcagcctttaagaacattgct
accagctcgggcgaaaccctgcgcacctcccgcgacattctcacggccaccgagattcaa
aaaacgtccatcggtgacgtggtgaagtacgtggaagaagtggtagccattgccgagcag
acggcctcgggcacgcagcaggtagccggcacagccaagcagctctcttcgagcatgcac
gagctgaccgtttccagccagcgcctcaccgacattgccgacgacctgcagctggggctg
tcgaacttccagctgctggaggaaatcgagccggaaccggagccggagcctgtccgtcac
cggtcgcgccgcatggcgcaccagccggcttcggccacgccggagcgcgaccgggccacc
gtgcgccgcgccgatgcggctaccgatgccgcgcatgcccaggccgtagccaaccgtccg
ctcacgaccacgcgccggggcgacgcccgcgctacggctgctgccccggcacccgtgcgc
aagcaaaccaatgccgagcaggccgaagcgcagcgtagccgcaaggccagccgccgcaaa
gcggatgcggcaccagcagcagcagcgacttctaacggcaaggctcctgccgaggtaccg
gctgccaagcctgcgcgcgtccgtagccgcaaagaagcgaaatag
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