Hymenobacter canadensis: O3303_05050
Help
Entry
O3303_05050 CDS
T09156
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hcw
Hymenobacter canadensis
Pathway
hcw03030
DNA replication
hcw03430
Mismatch repair
hcw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O3303_05050
03430 Mismatch repair
O3303_05050
03440 Homologous recombination
O3303_05050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hcw03032
]
O3303_05050
03400 DNA repair and recombination proteins [BR:
hcw03400
]
O3303_05050
Enzymes [BR:
hcw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
O3303_05050
DNA replication proteins [BR:
hcw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
O3303_05050
DNA repair and recombination proteins [BR:
hcw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
O3303_05050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
DUF7508
DNA_pol_A_exo1
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
WBA42931
UniProt:
A0ABY7LTX2
LinkDB
All DBs
Position
complement(1169263..1170819)
Genome browser
AA seq
518 aa
AA seq
DB search
MYAIIDLETTGGQPTQDRITEIAIFIHDGEKVVDQFDTLLNPGRPIPFFITQLTGISDEM
VRDAPKFHEVARKVVEMTEGCVFVAHNVRFDYSFLKKEFGDLGYTYSRKTLCTVRLSRSL
MPGQPSYSLGKLCQNIGIPLNGRHRAAGDAAATAILFDRLLKISQQEEALAQPGLSPADT
LAAVDANAPAGRRPAPAPARAASAASVGSDTTETTVAVPTKQPSARKVKAVQDAIRTALL
PPNITPEKVASLPHTAGVYYFHDEKGEVIYVGKSINIYKRIQQHFAIDYKSRKSIEFKNS
ISDITWELTGSELVALLYESHEIKRLKPLYNRKLRRSVFPAGIFLRTDEQGYKHLYYGRA
DDHTGSHPLIALGNQFKAKGFLFHKVAKFNLCQKLCDLYKTNGSCFDYQVHRCNGACLGL
EPAEEYNKRVEEAIESFTYEHGSFVVIGPGRRDDEKTVVLVEHGRYLGFGYVDTETFSAR
RLDDFKEVITRYNDNKDAQQIIRQYLRTKHKDKVKVFK
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
ttgtacgccatcatcgaccttgagactaccgggggccagcccacgcaggaccgcatcacc
gaaatagccatctttattcacgatggcgaaaaggtggtggaccagttcgacaccctgctg
aatccggggcgccccattccgtttttcatcacccagcttaccggcatcagcgacgagatg
gtgcgcgacgcgcccaagtttcatgaggtggcccgcaaggtggtggaaatgaccgagggc
tgcgtatttgtggcccacaacgtgcggttcgactactcgtttctgaaaaaggaatttggc
gacctgggctacacgtactcgcgcaaaacgctgtgcacggtgcgcctgagccggtcgctg
atgccgggccagcccagctacagcctcggcaagctgtgccagaacatcggtattccgctc
aacggccgccaccgcgccgccggcgacgccgccgccaccgccatcctgttcgaccgcctg
ctcaaaatcagccagcaggaagaagctctggcacagcccggcctctcccccgccgatacg
ctggccgccgtggatgccaacgcccccgccggccgccggccggcccccgcgcccgcccgc
gccgccagcgccgccagcgtcggttccgatactacggaaactactgtggccgtgcctacc
aaacaaccctcggcccgcaaggtgaaggccgtgcaggatgccatccgtacggcgctgctg
ccacccaatatcacgcccgagaaagtggcgtctttgccccacacggccggcgtctactac
ttccacgacgagaagggcgaggtgatttacgtgggcaagagcatcaatatctacaagcgg
attcagcagcactttgccatcgactacaagtcgcgcaagagcattgagtttaagaactcc
atttcggatatcacctgggagttgacgggctcggaactggtggcgctgctttacgagtcg
cacgaaatcaagcgcctcaagccgctctacaaccgcaagctgcgccgctcggtgtttccg
gccggcattttcctgcgcaccgacgagcagggctacaagcacctctactacggccgcgcc
gacgaccacaccggctcccacccactgattgcgctcggcaaccagttcaaggccaagggc
tttctgtttcacaaggtggccaagttcaacctgtgccagaagctctgcgacctgtacaaa
accaacggctcgtgctttgactaccaggtgcaccgctgcaatggcgcatgcctgggtctg
gagcccgcggaagagtacaataagcgggtggaagaagccatcgaaagcttcacctatgag
cacggctcgtttgtggtgattggccccggccgccgcgacgatgagaagacggtggtgctg
gtggagcacggccgctacctcggcttcggctacgtagacaccgaaactttctccgcccgc
cggctcgacgacttcaaggaggtcattacccgctacaacgacaataaggatgctcagcag
attatccgacagtacctgcgcaccaagcacaaagacaaagtgaaggtgttcaaatag
DBGET
integrated database retrieval system
