Hymenobacter canadensis: O3303_05835
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Entry
O3303_05835 CDS
T09156
Name
(GenBank) Ig-like domain-containing protein
Organism
hcw
Hymenobacter canadensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
DUF11
Cadherin_5
Cadherin_4
Por_Secre_tail
CshA_repeat
Motif
Other DBs
NCBI-ProteinID:
WBA43084
UniProt:
A0ABY7LRP4
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All DBs
Position
1335109..1338951
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AA seq
1280 aa
AA seq
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MPLFVLLRLSAALTGLATGGMLLFSLPPAASRPAARPATTAPVALDDHLTRSYTAATDLD
ILGNDQAGNAALNPASVVLLGPVTSGTTDVAGTGGTFSVAPTGLLSARVPAFNGASTVAS
IRYTVQDQAGETSAPATLHLTLTNAPPQAQPDAATTATNTPVMLAVASNDSDADGPTTLR
PATVVLTSEAGTNGGGSFHADGNGTVTFTPAGGFSGTSSTSYTIRDEQGLASAPALLTVT
VSNATPVAVRDVAATLAGTPVQVAVLLNDSDDNGYGTLVPGSVVLSPGNGLTSGGQFSVD
AATGVVTFVPAIGSTGATIGYRVRDTQGALSNSANLTVSITTVSADVQATLRGPATTPAG
GFAEYTLTLNNQGSVAATGVQGRVRLPAYLSQVTASHNAVYLASTGAVAFPAADLPAAGT
RVHTVRFLMPARASVAALGFSTASAADLVIENNNGSQANAAASTAPTQVADVVAVGTGPA
TASASGSVSYQLMAVNYGPSVATDVSLGAQLPANLSGVTVSGGGSYDAGSGRVTLPPVPA
LAARAGLSCQVSFDVPPASTTLAGQVWATSGTADGDPAPANNDGSSPLAALRTTFSGPVA
STYCAGPATLDATTTGGQLLNAYYPGLGTTTGTNVSVGPALSPVEAAPIQAGDLVLVMQM
QGADLDYANTAAYGDGAAHDDIPANGNLLTNFSAGLYEYRYVTLSNVTPTGGGTLVLASA
LTNTYTNAEATNSTGARRYQVLRVPRFRHLTLGADLRPAPWNGRTGGVLALQAEGALDLA
GYRLDARGCGFRGGGSYLQGGPGPASTSTTDWAMGWGNAVHASKGEGLAGSPRLVNQGGV
LLNTGAEGYPGGSMGRGAPGNAGGGGTDGSVLTNQNNTGGGGGSNGGFGGQGGNAWFLGN
ATGGSGGAPFLAAHPGRVVLGGGGGAGSSNNGTGGLGQAITVNNGFNSSGGAGGGIVLLS
AGQVTGPGTIDVSGTSVTLPVDNDGGGGGGGSGSVVVLSSSSLAGLTVVANGGRGGDDNL
TVTAPHGPGGGGSAGVVFASGPLNAASQALPGSNGLTGSTNGPGAFGATPGTQLPFQWRT
NLVPAEVPLPAECQLVPLPVSLIRFDAAANGAAVELTWATAQEVNSARFEVERSPDGRRF
ARVGRRAAAGHSTSPRTYAFTDLPAAAAANGLLYYRLRLLDLDSSATLTPVRVVQFRPTT
QAQPTVFPNPTSAGTTLDLTTLPAATYSVALFNLLGQRLQQYEPATNQRVQLNTRPLPPG
IYLLQISAPGYRWCQKLIRQ
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgcctctattcgtactactccgcctgagcgctgccctgactggtttggcgacgggggga
atgctactgttttcgctgcccccggccgccagccggccggccgcacgaccagccaccacg
gcgcccgtcgccctcgacgaccacctgacccgctcctacacggcagctaccgacctggat
attctcggcaacgaccaggccggcaacgcggccctgaatcccgcctccgtggtgctactg
ggccctgtcaccagcggcaccaccgatgtggccggcaccgggggcacgttttcggtggcg
cctaccggactgctgagtgcccgcgtgcccgccttcaacggggccagcacggtggcttcc
atccgttacaccgtgcaggaccaggccggggaaacctcggcgcccgctacccttcacctg
accctcacgaacgcgccgccccaggcccagcccgacgccgctaccacggccaccaacacg
cccgttatgctggccgtggccagcaacgacagcgatgccgacggccccaccaccctgcgc
cccgctaccgtggtcctgacttccgaggcaggcaccaatggcggcggcagcttccacgcc
gatggcaacggcacggtcacgttcacgccggcgggcggctttagcggcaccagcagcacc
agctacaccattcgcgacgagcagggcctggcctcggccccggccctgctgaccgtgacc
gtgagcaacgccaccccggttgccgtgcgcgacgtggccgccaccctggccggcaccccc
gtgcaggtggccgtgctgctgaacgacagcgacgacaacggctacggcacgctggtcccg
ggcagcgtggtgctcagccccggcaacggccttaccagtggcgggcagttttcggtggat
gccgccaccggcgtggtcaccttcgtgccggcgattggctccaccggggccaccatcggc
taccgggtgcgcgatactcagggcgcactctccaactccgccaacctgaccgtgagcatt
accaccgtcagcgccgacgtacaggccacgctgcgcggcccggcaaccacgccggccggg
ggcttcgccgagtacacgctcacgctcaacaaccagggcagcgtggcggccacgggggtg
cagggccgggtgcggctgccggcctacctgagccaggtgacggcctcacacaacgccgtg
tacctcgccagcaccggggcagtggcgtttccggccgccgacctgcccgcggctggcacc
cgcgtgcacaccgtgcgctttctgatgccggcccgcgccagcgtcgcggccctgggcttc
agcacggcttcggccgccgacctcgttatcgagaacaacaacggcagccaggctaacgct
gccgccagcaccgctcccactcaggtggccgacgtggtagcggtgggcacgggtccggcc
accgcctcggcctccggaagcgtgagctaccagctgatggccgtgaactacgggccttcg
gtggctaccgacgtcagcctgggcgcccagctgccggccaacctgagcggcgtaacggta
tcgggcggcggcagttacgatgccggctccggccgcgtgactttgccgcccgtcccggca
ctggcggcccgggccggcttaagctgccaggtgagctttgatgtgcccccggctagcacc
accctggccggccaggtctgggccacttccggcacggccgacggcgacccggccccggcc
aacaacgacggcagcagcccgctggccgcgctccgcaccaccttcagcgggccggtggcc
agcacctactgcgcgggcccggccacgctggacgccaccaccaccggcggccagctgctg
aacgcgtattaccccggcctgggcaccaccaccggcaccaacgtgtccgtaggcccggcc
ctgagcccggtggaagccgcgcccattcaggccggcgacctggtgctggtgatgcagatg
cagggggccgacctggactatgccaacaccgccgcctacggcgacggggcagcccacgac
gacatcccggccaacggcaacctgctaaccaacttcagcgccggcctctacgaataccgc
tacgtgaccctgtccaacgtgaccccgaccgggggcggcacgctggtgctggcctcggcc
ctcaccaacacctacaccaacgccgaggccacgaacagcaccggcgcccgccgctaccag
gtgctgcgggtgccgcgcttccgccacctcacgctgggggccgacctgcgccccgcgccc
tggaacggccgcaccggcggggtgctggcgttgcaggccgaaggcgcgctcgatctggcc
ggctaccggctcgatgcccggggctgcggcttccggggcggcggcagctacctccagggc
ggccccggccccgccagcaccagcaccaccgactgggccatgggctggggcaatgccgtg
cacgcctccaaaggcgaagggctggccggcagtccgcgcctggttaaccaggggggcgtg
ctgctcaataccggggccgaagggtatccgggcggctccatgggccgcggtgcgcccggc
aacgccggcggcggcggcaccgacggcagcgtgctcaccaaccagaacaatacaggcggc
ggcggcggctcgaacggcggctttggcgggcagggcggcaatgcctggtttctgggcaat
gccaccggcggcagcggtggggcgccgtttctggccgcccaccccggccgggtggtgctg
ggcggcggcggcggggccggctcctccaacaacggcaccggcggcctcggccaggccatc
accgtcaacaacggcttcaactccagcgggggtgccgggggcggtattgtgctgctgagc
gcgggccaggtgaccgggccgggcaccattgatgtcagcggtacctcggttacgctgccg
gtcgacaacgacggcggtggcggcggcggcggcagcggaagcgtggtagtgctcagcagc
agcagcctggcgggcctgacagtggtggccaacggcggccggggcggcgacgacaacctg
accgtgacggcgccgcacggaccgggcggcggcggctcggccggcgtggtgtttgcctcc
gggcccctcaacgcggcctcgcaggcactgccgggcagcaatggcctgaccggctccacc
aacggccccggtgccttcggcgctacacccggcacccagttgccgtttcagtggcgcacc
aacctggtaccggccgaggtaccgctgcccgccgagtgccagctggtgccgctgccggtg
tcgctcatccgctttgacgcggcggcaaacggcgcggccgtggagctgacgtgggccacg
gctcaggaagtgaacagtgcccgctttgaggtggagcgcagccccgatggccgccggttt
gcccgcgtgggccgccgcgcggccgccgggcacagcacaagcccgcgcacctacgccttc
accgatttgcctgccgcggccgcggccaacggcctgctctactaccgcctgcggttgctg
gacctagacagcagcgcgaccctcactccggtgcgggtggtgcagttccggccgacaaca
caggctcagccaactgttttccccaatcctacatcggccggcaccacgctggatttgacg
accctgcccgccgccacgtattccgtggctctgttcaacctgctggggcagcgcctacag
cagtacgagccggccaccaaccagcgcgtgcaactgaacacccgcccgctgccccccggc
atctacctgctgcagatcagcgcgcccggctaccgctggtgccagaagctgatccgacag
taa
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