Hymenobacter canadensis: O3303_06545
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Entry
O3303_06545 CDS
T09156
Name
(GenBank) AAA domain-containing protein
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
hcw
Hymenobacter canadensis
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hcw03009
]
O3303_06545
03012 Translation factors [BR:
hcw03012
]
O3303_06545
Enzymes [BR:
hcw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
O3303_06545
5.6.2.5 RNA 5'-3' helicase
O3303_06545
Ribosome biogenesis [BR:
hcw03009
]
Eukaryotic type
Other ribosome biogenesis factors
O3303_06545
Translation factors [BR:
hcw03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
O3303_06545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_30
AAA_19
Viral_helicase1
UvrD-helicase
SMUBP-2_HCS1_1B
DEAD
AAA_16
nSTAND3
SLFN-g3_helicase
Helicase_RecD
ResIII
AAA_22
HEM4
PhoH
AAA_25
Flavi_DEAD
NPHP3_N
T2SSE
UvrD_C_2
AAA
AAA_24
Fasciclin
DAP3
AAA_5
ATPase
cobW
TsaE
Zot
Herpes_ori_bp
Motif
Other DBs
NCBI-ProteinID:
WBA43219
LinkDB
All DBs
Position
1497187..1499169
Genome browser
AA seq
660 aa
AA seq
DB search
MAEQPTYTEPYALEKELRKVQALMKLEQQEDLEQFKIKSAQATIAERQKRGLTWYPVKIT
KEDIGFGGKLVIELERQGNTSGLHLFQVGKNAALFGNIPGRSGSDRPTLSGVVTSVKRNK
ILLATTKEDLPDWVDEGKLGVDLTFDEVSYREMEYALGKVMGAYDSRLAELRDVLLGAKP
ARFRPEAEATLYYPSPLNESQLSAVRHVLAAQDVAIIHGPPGTGKTTTLVQAILETIRRE
RRVLVCAPSNTAVDLLTEKLAERGVNVIRMGNPSRVSDLLLQHTLDAQIMAHKSYAELRS
LRQTAEQYREQAGKFKKHFGWEEREQRRLLKEQAHQLLQESDQLERYITEDLLEQVQVIT
CTLVGAGNRAIRHLTYETVFIDEAAQALEPGCWIPITKANRVVLAGDHQQLPPTVKSDKA
AREGLRETLFEKCIVRQPDTARMLQVQYRMHEQIMAFSSEQFYDGKLVAAPTVAHADLPD
YDLRFAPDMAVEFLDTAGFGFQEITIEESRSTANPEEADLLLKRLAQLLEPYDQADHEAD
LLTIGVIAPYRAQINYLKDAIEENDELVGLMEHRMLSVGTVDSFQGQERDIIAISLTRSN
PQGEIGFLSDIRRMNVGMTRARRKLLLVGDSSTLGSHPFYKAFLDYVESIGAYRTAWEMQ
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
ttggctgaacaacctacctataccgaaccttacgccctcgaaaaggagctgcgcaaggtg
caggccctcatgaagctcgagcagcaggaggacctcgaacagttcaaaatcaaaagcgcc
caggccaccattgctgagcgccagaagcggggcctcacctggtacccggtcaaaatcacg
aaggaagacattggcttcggcggcaagctcgttattgagcttgagcgccagggcaatacc
agcgggctgcacctgtttcaggtgggcaagaacgccgctttgttcggcaatattcccggc
cgctcgggctccgaccggcccacgctgtcgggcgtggtgaccagcgtcaagcgcaacaaa
atcctgctggccaccaccaaggaagacctacccgactgggtggacgagggcaagctgggc
gtggacctgaccttcgacgaggtgagctaccgcgagatggagtacgccctgggcaaggtg
atgggcgcctacgactcgcgcctggccgagctgcgcgacgtgctgctgggggccaaaccg
gcccgcttccggcccgaggctgaggcaacgctctactacccctcgcccctgaacgagagc
cagctttcggccgtgcgccacgtgctggcggcccaggatgtggccatcatccacggcccg
cccggcaccggcaaaaccaccaccctggtgcaggccattctggaaaccatccgccgggag
cggcgggtgctggtgtgcgccccctccaacacggccgtggatttgctcaccgaaaagctg
gccgagcgcggcgtaaacgtcatccggatgggcaacccctcccgcgtgtccgacctgctg
ctgcagcacacgctggacgcccagattatggcgcacaaaagctacgccgagctgcgcagc
ctgcgccagaccgccgagcagtaccgcgagcaggccggcaagttcaagaagcactttggc
tgggaggagcgcgagcagcggcgcttgctgaaagagcaggcccaccagctgctgcaggaa
tcggaccagctggagcgctacatcacggaggatctgctggagcaggtgcaggtgattacc
tgcacgctggtgggcgccggcaaccgcgccatccgccacctcacctacgaaaccgtgttc
attgacgaggccgcccaggccctggagccgggctgctggattccgattacgaaggccaac
cgcgtggtactggccggcgaccatcagcagctgccgcccaccgtgaaaagcgacaaggcg
gcccgtgagggtctgcgcgaaacgctgtttgagaagtgcatcgtgcgccagcctgacacg
gcccggatgctgcaggtgcagtaccgcatgcacgagcagattatggccttcagctccgag
cagttctacgacggcaagctggtggccgcccccaccgtggcccacgccgacttgcccgac
tacgacctgcgcttcgcccccgatatggcggtggagtttctggatacggccggcttcggc
ttccaggaaatcaccatcgaggaaagccgctccacggccaaccccgaagaagccgacctg
ctgctcaagcgcctggcgcaactgctggagccctacgaccaggccgaccacgaagccgac
ctgctcaccatcggcgtgattgcgccctaccgcgcccagatcaactacctcaaggacgcc
atcgaggaaaacgacgagctggtgggcctcatggagcaccgtatgctaagcgtgggcacc
gtggactcgttccagggtcaggagcgcgacatcatcgccatcagcctcacccgctcgaac
ccccagggtgaaatcggctttctgagcgacatccgccgcatgaacgtgggcatgacccgc
gcccgccgcaagctcctgctcgtcggcgactccagcacgctcggttcccacccattctac
aaggccttcctggattacgtggagagcatcggggcctaccgcacggcctgggaaatgcag
tag
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