Hymenobacter canadensis: O3303_06855
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Entry
O3303_06855 CDS
T09156
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
hcw
Hymenobacter canadensis
Pathway
hcw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O3303_06855 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcw03019
]
O3303_06855 (groL)
03110 Chaperones and folding catalysts [BR:
hcw03110
]
O3303_06855 (groL)
03029 Mitochondrial biogenesis [BR:
hcw03029
]
O3303_06855 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hcw04147
]
O3303_06855 (groL)
Enzymes [BR:
hcw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
O3303_06855 (groL)
Messenger RNA biogenesis [BR:
hcw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
O3303_06855 (groL)
Chaperones and folding catalysts [BR:
hcw03110
]
Heat shock proteins
HSP60 / Chaperonin
O3303_06855 (groL)
Mitochondrial biogenesis [BR:
hcw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
O3303_06855 (groL)
Exosome [BR:
hcw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
O3303_06855 (groL)
Exosomal proteins of other body fluids (saliva and urine)
O3303_06855 (groL)
Exosomal proteins of breast cancer cells
O3303_06855 (groL)
Exosomal proteins of colorectal cancer cells
O3303_06855 (groL)
Exosomal proteins of bladder cancer cells
O3303_06855 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Pho88
Motif
Other DBs
NCBI-ProteinID:
WBA43280
UniProt:
A0ABY7LS88
LinkDB
All DBs
Position
1570113..1571753
Genome browser
AA seq
546 aa
AA seq
DB search
MAKNIQFDTDGRDKLKRGVDKLANAVKVTLGPKGRNVVIDKKFGAPSITKDGVTVAKEIE
LSDPVENMGAQLVKEVASKTADQAGDGTTTATVLAQAIYAAGSKNVAAGANPMDLKRGID
KAVIAVVANLKAQSKKIENSSEIAQVGAISANNDMEIGKMIADAMDKVGKEGVITVEEAR
GTETEVKTVEGMQFDRGYLSPYFVTNPEKMEAEFDNPYILIYDKKVSTMKELLPVLEQVV
QSGKPLVIISEDVDGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAVLTGGTVI
SEERGYKLDSATLEYLGTAEKVIIDKDNTTIVNGKGEKETITARINEIKAQISTTTSDYD
KEKLQERLAKLSGGVAILYIGASTEVEMKEKKDRVDDALHATRAAVEEGVVPGGGVALVR
ALDALDAVDTHNGDERTGVNIIRTALEAPLRTIVQNAGGEGSVVVQKVREGKGDYGYNAR
EDRYENLMAAGILDPTKVTRLALENAASIAGLLLTTECVISDEPEAEKDHSHGGGGAGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaacatccaattcgataccgacggccgcgacaagctgaaacgcggcgtagac
aaactggctaacgccgtgaaagtaaccctcggcccaaaaggccgcaacgtggttatcgac
aagaaattcggcgccccgagcatcaccaaagatggtgtgacggtagccaaggaaattgag
ctgagcgacccggtggaaaacatgggcgcccagttggtgaaggaagtagccagcaaaacg
gctgaccaggccggcgacggcactaccaccgccaccgtactggctcaggccatctacgcc
gccggttcgaagaacgtagctgctggtgccaacccaatggacctgaagcgcggcatcgac
aaggcagtaattgctgtagttgccaacctgaaggcgcagtccaagaagattgaaaactcg
tcggaaattgcccaggtaggcgctatttcggccaacaacgacatggaaatcggcaaaatg
attgccgatgctatggacaaagtgggaaaggaaggcgtgattaccgtggaagaagcgcgt
ggcaccgaaaccgaagtgaaaacggtggaaggcatgcagttcgaccgcggctacctctcc
ccttacttcgtgaccaacccggagaagatggaggccgagttcgacaacccgtacatcctc
atctacgacaagaaggtgagcaccatgaaggagctgctacccgtactggagcaggtggta
caaagcggtaagccgctcgttatcatctccgaagacgtagacggcgaagctctggcgacg
ctggtagtaaacaagctgcgtggctcgctgaaaattgcagccgtaaaagctcctggcttc
ggcgaccgtcgtaaggccatgctggaagacattgctgtcctgacgggcggtacggttatt
tcggaagagcgcggctacaagctcgacagcgctacgctggagtacctcggtacggccgag
aaagttatcattgacaaggacaacacgaccatcgtcaatggtaagggtgagaaggaaacc
atcaccgcccgcatcaacgaaatcaaagcccagatcagcaccaccacgtcggactacgac
aaggagaagctgcaggagcgcctggccaagctgtcgggtggcgtggccatcctctacatc
ggtgccagcactgaggtggagatgaaagagaagaaagaccgggttgacgatgccctgcac
gccacccgcgccgccgttgaggaaggcgtggtacccggcggcggtgtggccttggtgcgt
gcgctggatgcgctggacgctgtggatacccacaacggtgacgagcgtaccggtgtgaac
atcatccgcacggccctggaggctcccctgcgtacgatcgtgcagaacgccggtggcgaa
ggctcggtggtagtgcagaaggtgcgcgaaggcaaaggcgactacggctacaacgcccgc
gaggaccgctacgaaaacctgatggccgccggtatcctcgacccgaccaaagtaacgcgc
ctggcgctggagaatgccgcttctattgccggcctgctcctgaccaccgagtgcgtgatt
tcggacgagcccgaagctgagaaagaccacagccacggtggcggtggtgccggcatgggc
ggcatgggcggcatgatgtaa
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