Hymenobacter canadensis: O3303_07110
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Entry
O3303_07110 CDS
T09156
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
hcw
Hymenobacter canadensis
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hcw01002
]
O3303_07110
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hcw01011
]
O3303_07110
Peptidases and inhibitors [BR:
hcw01002
]
Cysteine peptidases
Family C82
O3303_07110
Peptidoglycan biosynthesis and degradation proteins [BR:
hcw01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
O3303_07110
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
WBA43328
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Position
complement(1636850..1638637)
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AA seq
595 aa
AA seq
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MNSPFRPAFFSTLLFWLMSLTMLASATSCSQEQKAQIKEALPGTPAKAGGQQPTLDSVYV
VRAMNAEPKFKDQVEWAKKFYRERQFRLGWFRNHELVPQAKTMLGVINKAGDEGLDPKEY
KTKDFEKLFADLETVQGDSVKRNALEKEIDVALSGTYFNWASDFYRGTVDPRAVKTIDWQ
VKRNKIKLHKALMTILQERESTYPYYEFEPLHPEYEQLKKVLADYRALQRNGGWPTLPVT
TKLKPGQATPAVATLRQRLMGTKAAPMAAPVAAAATEGTPARTVANNPAAVAPVAAVPAE
KYDAELVEAVKNFQSQNGLNPDGVVGGETLRLLNVPVSQRIDQIIVNMERWRWIPKKFEA
DYLLVNIPDYKLHVVEANKEVFDMRVIVGKALNATPVFSDKMEYVVLAPYWNVPYSIIDK
EMRPKLAANAQSYLDRLDMEVVKGSGAKATPVDPNSVNWASLTPATWKYTLRRRPGPKND
LGDVKFIFPNSNDVYLHDTPHDELFSQAKRGFSHGCVRVAEPLKLAEYLLRNKPGWDMTK
IEETIAGRKELYVNLPKHVPVYLVYFTSWVDEAGNVNFRDDIYGHDKSLAKEYFN
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaccgttccgtccggctttcttttccaccctgttgttctggctcatgagcctc
acgatgctggcctctgccacctcgtgcagccaggagcaaaaggcccagatcaaggaagcc
ctgcctggcaccccggccaaagccggtgggcagcagcctactctcgacagcgtatatgta
gtacgcgccatgaatgccgagcctaaattcaaggaccaggtggaatgggccaagaagttc
taccgcgagcggcagttccggttgggctggttccgcaaccacgagctggtaccgcaggct
aaaactatgctcggcgttatcaacaaggccggcgacgaagggcttgatcctaaagagtac
aaaaccaaggacttcgagaagctgtttgccgatctggagaccgtgcagggtgattccgtc
aagcgcaacgcgctggaaaaggagattgacgtcgctttgtccggcacctatttcaactgg
gcttccgacttctaccggggcactgtagacccgcgcgcagtcaagaccatcgactggcag
gtgaagcgcaacaagatcaagctgcacaaggccctgatgacgatcctgcaggagcgggaa
agcacctacccctactatgagttcgagccgctgcatccggagtatgagcagctgaaaaag
gtcttggccgactaccgcgctttgcagcggaacggcggttggccaacgctacccgttacc
accaagctcaagcctgggcaggccacgccggccgttgctacgctgcgccagcgcctgatg
ggcaccaaggctgccccgatggctgctcccgtagcggccgctgctaccgagggcactccg
gctcgcacagtggccaacaatccagcagcggtggcccctgttgccgcagtgccggccgag
aaatatgatgccgaactggtggaagctgtgaaaaatttccagagtcagaacggcctcaat
ccggacggagtagtggggggcgaaaccctgcgtttgctcaatgtacccgtgtcccagcgc
atcgaccagatcatcgtgaacatggagcgctggcgctggattccgaagaagtttgaggcc
gactacctgctggtaaacatccccgattacaagctgcacgttgtcgaagccaacaaggaa
gtattcgacatgcgcgtgattgtgggcaaggcgctcaacgctacgccggtcttctccgac
aagatggaatacgtggtgctggctccctactggaacgtgccctacagcatcatcgataag
gagatgcgccccaagctggctgccaatgcgcagtcctacctcgaccgcctcgatatggaa
gtggtgaagggttcgggtgccaaggctaccccggttgaccccaacagcgtcaactgggcc
agcctcacgccggccacctggaagtacacgttgcgccgccgcccagggcctaaaaatgac
ctcggcgacgtgaagtttatcttcccgaattccaacgatgtttacctccacgacacgccc
cacgacgaactgttcagccaggccaagcgcggcttcagccacggctgcgtgcgggtagcc
gagcccctgaagctagccgaatacctgctccgcaacaagcccggctgggacatgaccaag
atcgaagagacgattgcgggccgcaaggaactgtacgtaaacttgccaaagcacgtgcca
gtgtatctggtctacttcacctcgtgggtagatgaagccggcaacgtgaacttccgcgac
gacatctatggccacgataaatccttggccaaggagtacttcaactag
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