Hymenobacter canadensis: O3303_07470
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Entry
O3303_07470 CDS
T09156
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
hcw
Hymenobacter canadensis
Pathway
hcw00541
Biosynthesis of various nucleotide sugars
hcw01100
Metabolic pathways
hcw01250
Biosynthesis of nucleotide sugars
Module
hcw_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
O3303_07470 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hcw01005
]
O3303_07470 (kdsB)
Enzymes [BR:
hcw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
O3303_07470 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
hcw01005
]
Lipid A
O3303_07470 (kdsB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
NYN_YacP
IspD
Motif
Other DBs
NCBI-ProteinID:
WBA43398
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Position
1720640..1721389
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AA seq
249 aa
AA seq
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MLAIGIIPARFASTRLPGKPLVDLGGQTMIERVVRQAQQSSLSRVVVATDDQRILEHVLG
FGGEAVLTHPDHPSGTDRVRDAYEQLGVQADCIINIQGDEPFIHPSQIDALVQLFAVPAP
PQLATLVKPVVSDEELFSPHLPKVVLNAQGEALYFSRHPLPYQRQHAPEQWLQHHRYLRH
IGLYAYRPDVLREITQLPPSPLELAESLEQLRWLEAGYRIQTAETTLETIGIDTPEDVER
ALRQLGIKN
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccatcggtatcattcccgcccgcttcgcctccacccgcctgcccggcaagccc
ctcgtcgacctcggcggccagaccatgattgagcgggtggtgcgccaggcccaacaatcc
agcctgagccgggtggtggtggccaccgacgaccagcgcattctggagcacgtgctgggc
ttcggcggcgaggccgtgctgacccatcccgaccatcccagcggcaccgaccgggtacgc
gacgcctacgagcagctgggcgtgcaggccgactgcatcatcaacatccaaggcgacgag
cccttcatccaccccagccagatcgacgcgctggtgcagctgtttgccgtgcccgcgccg
cctcagctggccacgctggtgaagcccgtggtgagcgacgaggagctgttcagcccacac
ctgcccaaagtggtgctcaacgcccagggcgaagcgctgtatttcagccgccaccccctg
ccctaccagcgccagcacgcacccgagcagtggctgcagcaccaccgctacctacgccac
atcggcctctacgcctaccgccccgacgtgctgcgcgaaatcacgcagctgccgccctcg
ccgctggagctggccgagagcctggagcagttgcggtggctggaagccggctaccgtatc
caaaccgccgaaaccaccctggaaaccatcggcatcgatacgccggaagacgtggagcgg
gcgttacggcagttgggaatcaagaattga
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