Hymenobacter canadensis: O3303_08200
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Entry
O3303_08200 CDS
T09156
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
hcw
Hymenobacter canadensis
Pathway
hcw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
O3303_08200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcw02000
]
O3303_08200
Transporters [BR:
hcw02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
O3303_08200
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
WBA43537
UniProt:
A0ABY7LVU6
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All DBs
Position
1905189..1906415
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AA seq
408 aa
AA seq
DB search
MKKYLFLFLPFLSACNPTDKAREPQQVLTQTWPQIEAAAKGQTVSMLMWMGDPLINRYMS
TYVKPELQRRYGIELEIAASQGAQLVQTLAAEQQAGQPSEADLVWINGETFYQLRQVDAL
LGPFVDKLPNAQLLDLQNPFINTDFQQPVAGMEAPWGNVQFNFIYDSARVARPPRSFAEL
PAFVQAHPGQFTIPNEFTGMTLLKSWMMALSGKPELFRGKFDEAVYRKWSGALWRQINTS
RPYFWKQGQTFPEQLAPLHQLFANGEVAFTFSNNDAEVDNKVNQKVFPATARAYVPLPGT
IQNSHYLGVVRGARHPEAALVAINFLISPEAQLRKMDPNVWGDHTVLNLQALPAAQRQQF
EQLPSRRYAPRRQNIQGQALMEPDPEYMTRLFKDFRTYVIEKQPVPAG
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaataccttttcctctttcttccatttctctccgcctgcaaccccaccgacaag
gcgcgggagccgcagcaggtgctcacccagacttggccgcagatagaagcggccgccaaa
ggccagacggtgagcatgctgatgtggatgggcgacccgctcatcaaccgctacatgagc
acctacgtgaagcccgagctgcagcgccgctacggcatcgagctggaaattgcggccagc
cagggcgcgcagctggtccagacgctggcagccgagcagcaggccgggcagcccagcgag
gccgatctggtgtggatcaacggcgagacgttttaccagctgcggcaggtagatgccctg
ctggggcccttcgtggacaagctgcccaatgcccagctgctggatctgcagaacccgttc
atcaataccgattttcagcagccggtggcgggcatggaagcgccctggggcaacgtgcag
ttcaacttcatctacgactcggcgcgggtagcgcggccgccccgctcgtttgccgagctg
ccggccttcgtgcaggcccaccctggccagttcaccatcccgaacgaattcacgggcatg
acgctgctcaagtcgtggatgatggcgctgtcgggcaagccggagctgtttcggggcaag
tttgacgaggccgtgtaccggaagtggtcgggcgcgctgtggcggcagatcaacaccagc
cggccgtatttctggaagcagggccagacgtttccggagcagctggcgccgctgcaccag
ctgttcgccaacggcgaggtggccttcaccttttccaacaacgacgccgaggtggacaat
aaggtgaaccagaaggtgtttccggctacggcccgcgcctatgtgccgctgccgggcacc
atccagaactcgcactacctgggcgtggtgcgcggcgcccgccaccccgaggcggcgcta
gtggccatcaacttcctgatttcgccggaagcccagctgcgcaaaatggaccccaacgtg
tggggcgaccataccgtgctgaacctgcaggcgctgcccgcggcgcagcggcagcagttt
gagcagctgccttcgcgccgctacgcgccccgccgccagaacatccagggccaggccctc
atggagcccgacccagagtacatgacgcgcctgttcaaggatttccgcacctacgttatc
gaaaagcagccggttccggccgggtag
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