Hymenobacter canadensis: O3303_09410
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Entry
O3303_09410 CDS
T09156
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
hcw
Hymenobacter canadensis
Pathway
hcw00541
Biosynthesis of various nucleotide sugars
hcw01100
Metabolic pathways
hcw01250
Biosynthesis of nucleotide sugars
Module
hcw_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
O3303_09410 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hcw01005
]
O3303_09410 (rfaD)
Enzymes [BR:
hcw01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
O3303_09410 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
hcw01005
]
Core region
O3303_09410 (rfaD)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
WBA43766
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All DBs
Position
2178469..2179437
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AA seq
322 aa
AA seq
DB search
MIVVTGAAGFIASGLVTRLNAAKFNDIVVVDNFAVERKLANLTGKHLREYVDRNEFFDWL
DINHAEVEFVFHLGARTDTTEQDRAVLDLLNLDYSKRMWQACVQYQLPLVYASSAATYGS
GTLGYSDHDDALLPLYRPLNPYGDSKNDFDNWAINQPEKPFFWAGLKFFNVYGPNEYHKS
RMASVILHAFEQIRKTGSMTLFRSHNPNFTDGGQMRDFVYVKDVVEVCLFLMHHRRNSGI
YNLGTGEARTFLDLALNTFAALDRTADIRFIDTPEDIRDKYQYFTQADMSKLRGIGYERP
FTRLEDGIDDYVRNYLVPGAYL
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgatagtcgtcaccggagccgccggctttattgccagcggccttgttacccgcctcaac
gccgccaagttcaacgatattgtggtggttgataacttcgccgtggagcgcaagctggcc
aaccttaccggcaagcacctgcgcgaatacgtggaccgcaacgagttttttgactggctc
gatattaaccacgccgaagtggagtttgtcttccacctcggagcccgcaccgacaccacc
gagcaggaccgcgccgtgctcgacctgctcaacctcgactactccaagcggatgtggcag
gcctgcgtgcagtaccagctgccgctggtgtacgcctcgtcggcggccacctacggctcg
ggcacgctcggctactccgaccacgacgacgcgctgctgcccctctaccgcccgctcaac
ccctacggcgactccaaaaacgacttcgacaactgggccatcaaccagccggagaagccg
tttttctgggccggcctgaagtttttcaacgtctacggtcccaacgagtaccacaaaagc
cgcatggcgtccgtgattctgcacgctttcgagcagatccgcaaaacgggctccatgacg
ctgttccgctcgcacaaccccaacttcaccgacggcggccagatgcgcgacttcgtgtat
gtgaaggatgtggtggaggtgtgtttgtttctgatgcaccaccgccgcaactccggtatc
tacaacctgggcaccggcgaggcccgcaccttcctcgacctggccctcaacaccttcgcc
gccctcgaccgcacggccgatatccggttcatcgacacgcctgaggatatccgcgacaag
taccagtacttcacgcaggccgacatgagcaagctgcgcggcatcggctacgagcggccc
ttcacccgcctcgaagacggcatcgacgactacgtgcgcaattacttggtgccgggcgcc
tatctgtag
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