Hymenobacter canadensis: O3303_09775
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Entry
O3303_09775 CDS
T09156
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hcw
Hymenobacter canadensis
Pathway
hcw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
O3303_09775
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcw02000
]
O3303_09775
Transporters [BR:
hcw02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
O3303_09775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WBA40124
LinkDB
All DBs
Position
complement(2278921..2280594)
Genome browser
AA seq
557 aa
AA seq
DB search
MFPFSRRAVGFAPLLLSLLSSCAEQGPPTDARRVFRYNQPESLTSLDPAFARNQANTWAV
TQLYNGLVALDDSLRPSPSVARRYEISPDGKTYTFWLRPEVRFHDDAVFAGGKGRRVLAQ
DFVYSFKRLLDGPTASPGGWIFRGKVLETSAGEPSDTAFVAVNDSTLRIHLREPFIPFLG
ILTMPYAYVVPREAVQKYGKDFREHPVGTGPFVFKQWDEGNAIIYHRNPSYWKKDAQGQP
LPYLDAVQISFIQDRKTEFLTFMQGKLDFLSGIRSGSRDLIMYPDGTVREDFQGKFQLQK
VPYLNTEYLGMQQDPANLRGDNAETGRALRDKRVRQALNYALNKPEFLAYFLNNVGKPGN
SGFVPASLPSFSAALVPGYTYQPEKARALLRAAGYGPGMPLKLRLSTVAETKEYCEYYQK
KWAEVGVQVEIDVNQGAAHGELIDNGRAAFFTRSWLGDYPDAENYLALFYSKNFAPAGPN
KTHFRSPAYDRLYEQAKLEQNTEKRYELYRQMDRLIVEECPVVAVYYDEVVRLTQNNVRG
LTPNPMNQLVLERVRKE
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtttccgttttcgcgccgtgccgttggttttgccccgcttctgcttagcctgctgagt
tcctgcgccgagcagggcccgcccaccgatgcgcgccgcgtcttccgctacaatcagccc
gagagcctgacctcgctggacccggcctttgcccgcaatcaggccaacacctgggccgtc
acccagctctacaacggcctcgtggccctcgacgacagcctgcggcccagccccagcgtg
gcccgccgctacgaaatatcccccgacggcaagacctacacgttctggctgcggcccgaa
gtgcgcttccacgacgacgcggtatttgcgggcggcaaaggccggcgcgtgctggcccag
gatttcgtgtacagcttcaagcgcctgctcgacgggcccacggccagccccggcggctgg
attttccggggcaaggtgctggaaaccagcgccggcgagccgtcggatacggcgtttgtg
gccgtgaacgactccacgctgcgcattcacctgcgggagccgttcattcctttcctgggc
atcctgacgatgccatacgcctacgtggtgccgcgtgaggcggtgcagaagtacggcaag
gacttccgggagcatccggtgggcaccgggccgtttgtgttcaagcagtgggacgagggc
aacgccatcatctaccaccgcaaccccagctactggaaaaaggacgcccagggccagccg
ctaccctacctcgatgcggtgcagatcagcttcattcaggaccgcaaaaccgaattcctg
accttcatgcagggcaagctggactttctgagcggtatccgtagcggctcccgcgaccta
attatgtaccccgacggcacggtgcgcgaggatttccagggcaaatttcagctgcagaaa
gtgccctacctcaatactgaatacctgggcatgcagcaggaccccgccaacctgcgcggc
gacaacgccgaaaccggccgcgccctgcgcgacaagcgcgtgcgccaggccctgaactac
gccctcaacaagccggagtttctggcttacttcctcaacaacgtgggcaagcccggcaac
tcgggcttcgtgccggcctcgctgccctcgtttagcgccgcgctggtgcccggctacacc
taccagcccgagaaggcgcgggcgctgctacgcgccgccggctatgggcccggcatgccg
ttgaagctgcgcctgagcaccgtggccgaaaccaaggaatactgcgagtactaccagaaa
aagtgggccgaagtgggcgtgcaggtggaaatcgacgtgaaccagggcgcggcgcacggc
gagctgatcgacaacggccgcgccgccttcttcacccgcagctggctcggcgactacccc
gacgcggaaaactacctggccctgttctacagcaagaacttcgcgcccgccggccccaac
aaaacccacttccgcagccccgcctacgaccgcctctacgagcaggccaagctggagcag
aacaccgaaaagcgttacgagctctaccgccagatggaccgcctcattgtggaggaatgc
ccggtggtggccgtgtactacgacgaagtggtgcgcctcacccaaaacaatgtgcgcggc
ctcacgcccaaccccatgaaccagctggtgctggagcgcgtgcgcaaggagtaa
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