Hymenobacter canadensis: O3303_10160
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Entry
O3303_10160 CDS
T09156
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hcw
Hymenobacter canadensis
Pathway
hcw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
O3303_10160 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hcw03400
]
O3303_10160 (priA)
Enzymes [BR:
hcw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O3303_10160 (priA)
DNA repair and recombination proteins [BR:
hcw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
O3303_10160 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PriA_C
nSTAND3
UPF1_Zn_bind
AAA_30
nSTAND6
TsaE
zf-HYPF
Zn_ribbon_6
APP1_cat
Zeta_toxin
AAA_16
AAA_22
AAA_11
HypA
Motif
Other DBs
NCBI-ProteinID:
WBA40196
UniProt:
A0ABY7LKC3
LinkDB
All DBs
Position
2371112..2373661
Genome browser
AA seq
849 aa
AA seq
DB search
MSLTFDFVQPQPEPAADRVTLFADVILPLPLPKLYTYRVPFELNDQVVIGGRVIVQFGAK
RTLSCIVAAVHETPPKDYQAKYILEFIDETPVVTQPQLKLFRWMADYYLCTLGEVINAAL
PAALKLNSESRVQLHPVWLNTDEADRYPLSEQEQKVVVALLDGEEGKSMTFTEVGDVLGI
ASFHKVIKSLMHKETIFLFEHLADKYSPKVVKKVRLAHHYVAEAALEGLFAQLASRAKQL
DVLMRYLQKVPVYQNEHANHNGIEKAYLSSAPHLSPSAVNTLIKNGVLEQFDVIVSRFPL
DDATEANMHFRLSETQQAAHDDILDQFNTKDIVLLHGVTGAGKTEIYIELIRQALDGGGQ
VLYLLPEIALTAQIVTRLMRVFGSRLGVYHSKFSDNERVEVWNGVLSGRFQVVVGVRSSV
FLPFDNLALLIVDEEHESSYKQYDPAPRYNAREVALMMANFQGAKTLLGSATPSVETYYQ
TRTGRYGLVSLTKRYGEAGLPEIELVDTRKAREAKTLLNHFTPELMAEMESKLAQKEQVI
LFQNRRGYAPFINCLDCGWIPKCTNCAVSLSYHKQAHELRCHYCGHHDRMPVQCPACGSR
NIKTVGFGTEKIEDDLKVMLPQASVQRMDLDTTRAKNSYQQIISDFEQQVTNVLVGTQMV
TKGLDFANVSLVGIINADSIIHYPDFRAHERAFQMFVQVSGRAGRKGKKGKVIIQTADPQ
QVIFDKVIRNDYLEFYEYEILQRREHGYPPFMRIIRLTVKHMDQLLCERAAMLLTGELVE
RLGREAVLGPEAPYIFRIRNFYLQEITIKLSREHTVLKAAKADILDAINLIRDQKDYKQA
RFVADVDPM
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
ttgagccttacgttcgactttgttcagccgcagccggaaccggccgccgaccgggttacg
ctcttcgccgacgtgattctgccgctgccgctgcccaagctctatacctaccgcgtgccc
ttcgagctgaacgaccaggtcgtgattggcgggcgcgtgattgtgcagtttggggccaag
cgcaccctgagctgcattgtggcggccgtgcacgaaacgccgcccaaagattaccaggcc
aagtacatcctggagttcatcgacgaaacgcccgtcgtgacccagccacagctcaagctg
ttccgctggatggccgactattacctctgtaccctgggcgaggtgataaacgccgcgctg
ccggccgccctcaagctcaactccgagagccgcgtgcagctgcatccggtgtggctgaac
accgacgaggccgaccgctacccgctcagcgagcaggagcagaaagtggtggtggctttg
ctggacggcgaggaaggcaagtcgatgacgtttacggaggtgggcgacgtgctaggcatt
gcgtccttccacaaggtcatcaagagcctgatgcacaaggaaaccatcttcctgttcgag
catctggccgacaaatactcgccgaaggtggtgaagaaggtacggctggcccaccattac
gtggccgaggcggcgctggagggcctgtttgcgcagctggccagccgcgccaagcagctg
gatgtgctgatgcgctacctgcagaaggtgcccgtgtaccagaacgagcacgccaaccac
aacggcatcgagaaggcctacctgtcgtcggcgccgcacctgtcgccgtcggcggtgaat
acgctcatcaaaaacggcgtgctggagcagttcgacgtgattgtgtcgcggtttccgctg
gacgatgccacggaggccaacatgcacttccggctgagcgaaacccagcaggcggcccac
gacgacatcctggaccaattcaacaccaaggacattgtgctgctgcacggcgtaacgggc
gctggcaaaacggaaatctacatcgaactgatccgacaggcgctggacggcggcgggcag
gtgctgtacctgctgcccgaaattgccctcacggcccagattgtgacccgcctaatgcgc
gtgttcggctcgcggctgggcgtgtaccactccaaattctccgacaacgagcgggtggaa
gtatggaacggcgtgctttccggccgcttccaggtggtggtgggcgtgcgctcgtcggtg
tttttgccgtttgacaacctggcgttgctgattgtggacgaagagcacgaaagcagctac
aagcaatacgaccccgccccgcgctacaacgcccgcgaggtggctttgatgatggccaac
ttccagggcgccaaaaccctgctgggctcggccacgccgtcggtggaaacctactaccag
acccgcaccggccgctacggcctcgtgagcctcaccaagcgctacggcgaggccggcctg
cccgaaattgagctggtagacacccgcaaggcccgcgaagccaaaacgctgctcaaccac
ttcacgcccgagctgatggcggagatggaaagcaagctggcccagaaggaacaagtaatt
ctgtttcagaaccgccgcggctacgcgcctttcatcaactgcctggactgcggctggatt
ccgaagtgcaccaactgcgccgtgagcctcagctaccacaagcaggcccacgagctgcgc
tgccactactgcggccaccacgaccggatgccggtgcagtgcccggcctgcggctcgcgc
aacatcaaaaccgtgggcttcggcaccgagaagattgaggacgacctgaaggtgatgctg
ccccaggccagcgtgcagcgcatggacctcgacaccacccgcgccaaaaactcctaccag
cagatcatttcggacttcgagcagcaggtgacgaatgtgctggtgggcacccagatggtg
accaagggcctcgacttcgccaacgtgagtctggtgggcatcatcaacgccgacagcatc
attcactatcccgatttccgggcgcacgagcgggccttccagatgtttgtgcaggtgagt
gggcgcgccggccgaaagggcaagaaaggcaaggtcatcatccagaccgccgacccacag
caggtgattttcgacaaggtgatccgcaatgactacctggagttctacgagtatgaaatc
ctgcaacggcgcgagcatggctacccgccgttcatgcgcatcatccggctcaccgtcaag
cacatggaccaactactgtgcgagcgggctgccatgctgctcactggcgaactggtagaa
cggctgggccgcgaggcggtgctggggccggaagcgccgtatatcttccggatccgcaac
ttctacctgcaggaaatcaccatcaagctcagccgcgagcataccgtgctcaaagccgcc
aaagccgacatcctggacgccatcaacctgatccgcgaccagaaagactacaagcaggcc
cgcttcgtggccgacgtagacccaatgtag
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