Hymenobacter canadensis: O3303_10220
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Entry
O3303_10220 CDS
T09156
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
hcw
Hymenobacter canadensis
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcw03016
]
O3303_10220
Enzymes [BR:
hcw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
O3303_10220
Transfer RNA biogenesis [BR:
hcw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
O3303_10220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
WBA40208
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All DBs
Position
2388353..2389522
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AA seq
389 aa
AA seq
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MSAIQYLTTAAEVQQAALALSTAPRIAIDLEFDDMRHRYGRNLALIQIFDGQSMLLIDPL
PLTNPAHDLEPLWAILRDPAVEKVFHSCKSDILLLDELYGVHVRNITDTSVQYTLLAEAD
NNISLGRLIQSELGLEVDKGEQKSNWLKRPLTEAQKLYAANDVLYLFELADRLRDKLAAL
GRLHWADEENAALEEVRYTRDERPYLRVAGKYRIMPQEMPLFRDLYMLRDQVARQLDRPP
YMVFANERLPELVRDTPRSLNDWKNARGLHPELKRTPYLEQLTALSPDNFVAVPEPAVAG
EQRRFPFRRRLSGEKANRADAREQLLLQLKNHITTDLNGYVANLVLSNRLVADIIELGAD
QVLRPWQKTILQETTQRHGLEYSQIAEPF
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccattcaataccttaccactgctgcagaagtgcagcaagccgccctggcactc
agcacggccccccgcattgccatcgacctggagtttgatgacatgcgccaccgctacggc
cgcaatctggcgctgattcagatttttgacgggcagtccatgctgctcatcgacccgctg
ccgctcaccaacccggcccacgacctggagccgctctgggccattctgcgcgacccggcc
gtggaaaaggtgttccactcctgtaagtcggatattctgctgctcgatgagttgtacggt
gtgcatgtgcgcaacatcaccgacaccagcgtgcagtacacactgctggccgaagctgac
aacaatatttcgctgggccgcctgattcagtctgaactggggctggaggtggacaagggc
gagcagaaatccaactggctgaagcgcccactcacggaagcccagaaactgtacgccgcc
aacgacgtgctctacctgtttgagctggccgaccgcctgcgcgacaagctggccgccctg
ggccgcctgcactgggccgacgaggaaaacgctgccctggaagaagtacgctacacccgc
gacgagcgcccttacctgcgcgtagccggcaaataccgcatcatgccccaggaaatgccc
ctgttccgcgacctgtatatgctccgcgaccaagtggcccgccagctcgaccggccgccc
tacatggtgtttgccaacgagcgcctgccagagctggtgcgcgacacgccccgcagcctc
aacgactggaaaaacgcccgcggcctgcaccccgagctgaagcgcaccccgtatctggag
cagctaacggctctctcgcccgacaatttcgtggccgtgccggaaccggccgtggcgggc
gagcagcgccgcttcccgttccgccgccgcctcagcggcgagaaggccaaccgcgctgat
gcccgcgagcagctgctgctccagctcaaaaaccacatcaccaccgacctgaacggctac
gtggccaacctcgtgctgtccaaccgcctcgtggccgacatcatcgagctgggcgccgac
caagtgctgcgcccttggcagaaaaccatcctgcaggaaaccacccagcgccacggcctg
gagtatagccagatagccgagccgttttaa
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