Hymenobacter canadensis: O3303_10235
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Entry
O3303_10235 CDS
T09156
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
hcw
Hymenobacter canadensis
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hcw03000
]
O3303_10235
Transcription factors [BR:
hcw03000
]
Prokaryotic type
Helix-turn-helix
XRE family
O3303_10235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_31
HTH_19
HTH_26
Peptidase_M78
HTH_25
ScfRs
HTH_20
HVO_2718
Motif
Other DBs
NCBI-ProteinID:
WBA40211
UniProt:
A0ABY7LKD6
LinkDB
All DBs
Position
2392977..2394461
Genome browser
AA seq
494 aa
AA seq
DB search
MLSHGQVVRLIFGLKLRELRQERGFTPAELARACDVSVSYLNEIEKGKKYPKADKILGLS
KVLGVTYDQLTSLTLSRRLEPISELLQSDLLKEFPLEMFGLDPLRIVELIADAPAKMNAF
ISTIFEIARNYEMRQESFFLAALRSYQEMHDNYFEELEQDVRTFCGEQNLSTQAPFDTTQ
LERVLSQKYGYRLNREKLAEYAALGRLRSVFQPKTRTLLLRPGLSKAQESFVLGREVAFN
YLNLKERPYVNATFPVHSFDEVLNNFKASYFAGALLMEEESLVRDLQDFFGQATWQPERL
QAMLTKYDVSPEMFMQRITNLLPRYFGIQSLFFLRFDQPDADAAYLLTKELHLSRLHNPH
GNELHEKYCRRWVSIRLIREAREQAAGPAPSFVLGAQRSRYPNEDEYLCLSLARAGTATE
PAVSVTVGLLCDDNLRQKVQFLSDPAIVQKRVNETCERCSIADCEVRAAPPVEIARRQRQ
QEAADAIAALVNGE
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgctaagccacggtcaggttgtccgacttattttcgggctgaaactgcgcgagctgcgc
caggaacgcggcttcacgcccgccgagctggcccgcgcctgcgacgtgtcggtatcctac
ctcaatgagattgagaaaggcaagaagtaccccaaggccgacaagattctggggctgagc
aaggtgctgggcgtcacttacgaccagctcacgtccctgacgctaagccggcggctggag
ccgatttccgagctgctgcagtcggatctgctgaaggagtttccgctggagatgtttggg
ctggacccgctgcgcatcgtggagctgattgccgatgccccggccaagatgaacgccttc
atcagcaccatcttcgaaatagcccgcaactacgaaatgcggcaggaaagcttcttcctg
gccgcgctgcgctcctaccaggagatgcacgacaactattttgaggagctggagcaggac
gtgcgcaccttctgcggcgagcagaacctgagcacccaggctcccttcgacaccacccag
ctggagcgcgtgctcagccagaaatacggctaccgcctcaaccgggagaagctggcggag
tacgcggcgctgggacggctccggtcggtgtttcagcccaaaacccgcaccctgctgctg
cggccgggtttgagcaaggcgcaggagtcgtttgtgctgggccgcgaggtggccttcaac
tacctcaacctgaaggagcggccctacgtgaatgccacgttcccggtgcattccttcgat
gaggttctcaacaacttcaaagcctcttattttgccggggccttgctgatggaggaagaa
agcctggtgcgcgacctgcaggactttttcgggcaggccacctggcagccggagcgcctg
caggccatgctcaccaagtatgacgtgtcgccggagatgttcatgcagcgcatcaccaac
ctgctgccgcgctacttcggcatccagagtttgtttttcctgcgcttcgaccaacccgac
gcggatgcggcgtatttgttgaccaaggagctgcacctgtcgcggctgcacaacccgcac
ggcaacgagctgcacgagaaatactgccgccgctgggtgtccatccgcctgatccgggag
gcgcgggagcaggccgccggcccggcgccgtcttttgtgctgggtgcccaacgttcgcgc
tatcccaacgaggacgagtacctgtgcctctcgctggcccgcgccggcacggccaccgag
ccggccgtaagcgtcacggtgggtttgctctgcgacgacaacctgcgccagaaggtgcag
ttcctcagcgacccggccattgtgcagaagcgcgtaaacgaaacctgcgagcggtgctcc
attgccgactgcgaggtgcgggccgcgccgcccgtagaaattgcgcgccgccagcgccag
caggaagctgccgacgccattgcggccctggtaaacggcgagtag
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