Hymenobacter canadensis: O3303_11450
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Entry
O3303_11450 CDS
T09156
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
hcw
Hymenobacter canadensis
Pathway
hcw02024
Quorum sensing
hcw03060
Protein export
hcw03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
O3303_11450 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
O3303_11450 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
O3303_11450 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hcw02044
]
O3303_11450 (secDF)
Secretion system [BR:
hcw02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
O3303_11450 (secDF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
Motif
Other DBs
NCBI-ProteinID:
WBA40445
UniProt:
A0ABY7LJ18
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All DBs
Position
2678746..2681763
Genome browser
AA seq
1005 aa
AA seq
DB search
MRNKGLIIALTIIVSALCIYFLTFTFISRRVQNDAVVYATKGGQVNQKLRQRYLDSVWRA
PVTSLLGVDYTYRDVRSSELGLGLDLKGGMHVTLEVSPVEIVRAMSGNSKDPKFNQAMTQ
AQEAQKANPSTPFTTLFAQAYQTAAPGQNLARIFANTTNKSRGIDINSTNEKVIGAINKE
VEEAIDRSFNILRTRIDKFGTSQPSIQRVKGTGRIQVELPGVDNPDRVRKLLQGQAKLEF
WEVWRQDEFGPYLQQLDQALIAKEKAATTAKPATLAAATDTAAVAAGDSTSLASQLAKKN
AAPTAKTDTAAAAQQGSVLARLFTMPVPGQLGVNVQDTARMNTILRSDEARAILPPNLTF
LWSVKPDAINGQEYLKLNAIRKQPGTEAPLGGEVVADARQDYDQGGRPEVSMAMNPSGAK
KWQKLTGANIGRQVGIVLDDYVYSDPVVQSEIAGGNTSISGNFSIEEAQDLSNVLKAGKL
PAPTRIVEEAVVGPSLGQEAINQGLYSSLAGLIIIMAFMALYYGRAGMVADAALLFNGFL
ILGVLAQFSFALTLPGIAGLILVFASSVDANVLIFERIREELDHGLGLHDAINKGYSRAF
SAIFDSNVTTLIIALILFIFGTGPVQNFAVTLLIGIFTSFLSAVFISRLIIEWLVKGKEK
SSMTFSTFLSRKLFKDVNFDIVGKRKIAYAFSTIVIVAGFVLMAIQGGPNLGVDFRGGRA
YVVDFNKDMDASKVHDALVERAFQGAGTEVKTFGAPNRLRITTGYLADDESVVADKKVES
AMVSELTKDFAADAPVIKSTSKVGATIADDIKRTSVLSLGLTLLGIFIYVLFRFEKWQYS
MAAVIALFHDALLVIACYPIARLFGLNYEMDQIFVAAVLTVIGFSMNDTVVIYDRIREYL
RENPKLTFAQVANPALNSTFSRTMITFTTVFLVVAVLYVFGGETLRSFSFAMLVGMIFGT
YSSLFIATPIILDTYGRKEARERGTDMSTHINDGTDAPKLSTAQV
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaataaaggactcatcattgcgctgaccatcattgtgtcggcgctgtgtatctac
tttctgaccttcacgtttatttcgcggcgggtgcagaacgacgccgtggtgtatgccacc
aaaggcggccaggtaaaccagaagctgcgccagcgctacctcgactcggtgtggcgcgcg
cccgtgaccagcctgctcggcgtagactacacctaccgcgacgtgcgctcgtcggagctg
ggcctcggccttgacctgaaaggcggcatgcacgtgacactggaagtatcgccggtggag
attgtgcgcgccatgagcggcaactccaaggacccgaagttcaaccaggccatgacgcag
gcgcaggaagcccagaaggccaatccttcgacgcctttcactacgctcttcgcccaggcc
taccaaacggccgcgcccggccagaacctggcccgcatcttcgccaacaccaccaacaag
agccgcggcatcgacatcaactcgaccaacgagaaggttatcggcgccatcaacaaggaa
gtggaagaagccatcgaccgctcgttcaacatcctgcggacccgcatcgacaaattcggc
accagccagcccagcattcagcgcgtgaaaggcacgggccgcattcaggtggagctgccc
ggcgtagacaacccggaccgcgtgcgcaagctgctgcaaggccaggccaagctggagttc
tgggaagtatggcgtcaggatgagttcggcccttacctgcagcagctcgaccaggccctg
attgccaaagagaaagccgctaccactgccaagccggccacgttggccgccgccactgat
accgctgccgtagccgctggtgactctacctcgctggccagccagctggccaagaaaaac
gccgctccgactgctaagactgacaccgccgccgctgcccagcagggctcggtactggcc
cgcctgttcacgatgccggttcccggccagctgggcgtaaacgtgcaggacacggcccgc
atgaacaccatcctgcgttccgacgaagcccgcgctattctgccccccaacctgacgttc
ctgtggagcgtaaagccagacgccatcaatggccaggaatacctgaagctgaacgccatc
cgcaagcagcccggcaccgaggctccgctgggtggtgaggtggtggctgatgcccgccag
gactacgaccagggtggccgccccgaagtgagcatggccatgaacccctcgggcgccaag
aaatggcagaaactgaccggcgccaacatcggccgccaggtaggtatcgtgctcgacgac
tacgtgtactctgacccggtggtgcaatcggaaattgccggtggcaacaccagcatttcg
ggcaacttctccatcgaggaagcccaggacctttccaacgtactgaaagccggtaagctg
cccgccccgacgcgcatcgtggaagaagccgtagttggtccgtcgctgggccaggaggcc
atcaaccagggcctgtactcgtcgctggccggtctgatcatcatcatggccttcatggct
ctgtactatggccgcgccggtatggtggctgatgccgccctgctgttcaacggcttcctg
attctgggcgtactggcccagttttccttcgccctcacgctgcccggcattgccggtctg
atcctggtatttgcctcgtcggtggatgccaacgtactgatcttcgaacggatccgggaa
gaactggaccacggcctgggcctgcacgacgccatcaacaaaggctactcgcgcgctttc
tcggctatttttgactccaacgttaccacgctcatcatcgccctgatcctgttcatcttc
ggtacgggtccggtgcagaacttcgccgtaacgctactcatcggtattttcacctcgttc
ctgtcggccgtattcatctcgcgtctcatcatcgagtggctggtgaagggcaaggagaag
agcagcatgacgttctcgaccttcctgtcgcgcaagctgttcaaggatgtcaacttcgac
atcgtgggcaagcgcaagattgcctacgccttctcgaccatcgttatcgtggccggcttc
gtgctgatggccattcagggcggcccgaacctgggcgttgacttccgcggcggccgcgct
tacgtggttgacttcaataaggacatggacgcttccaaggtgcacgacgccctggtggag
cgggctttccagggtgctggtacggaggtgaaaaccttcggcgccccgaaccgtctgcgc
atcaccaccggctacctggccgatgacgaatcggtggttgccgacaaaaaagtggagtcg
gccatggtttcggagctcaccaaggacttcgccgccgatgccccggttatcaagtccacg
tcgaaagtaggcgctaccatcgccgacgacatcaagcgcacttcggtgctgagcctgggc
ctgacgctgctcggcatcttcatctacgtgctgttccgcttcgagaagtggcagtattcg
atggccgctgtaattgcgctcttccacgatgcgctgctggtaattgcctgctacccgatt
gcccgtctgttcggcctgaactacgaaatggaccagattttcgtggctgccgtgcttacc
gtaattggtttctcgatgaacgataccgtagttatctacgaccggatccgcgagtatctg
cgcgaaaacccgaagctgacgtttgcgcaggtagccaatccggccctgaactccacgttc
tcgcgcaccatgattacgttcaccacggtgttcctggtggtggccgtgctttacgtgttc
gggggtgaaacgctgcgctcgttctcgtttgccatgctcgtgggcatgatcttcggcacg
tactcgtcgctgttcatcgccacgccgatcatcctcgacacctacggccgcaaagaggcc
cgcgagcggggcaccgacatgtcgacgcacatcaacgacggcaccgacgccccgaaactc
tcgacggcgcaggtataa
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