Hymenobacter canadensis: O3303_11890
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Entry
O3303_11890 CDS
T09156
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
hcw
Hymenobacter canadensis
Pathway
hcw00300
Lysine biosynthesis
hcw00470
D-Amino acid metabolism
hcw01100
Metabolic pathways
hcw01110
Biosynthesis of secondary metabolites
hcw01120
Microbial metabolism in diverse environments
hcw01230
Biosynthesis of amino acids
Module
hcw_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
O3303_11890 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
O3303_11890 (dapF)
Enzymes [BR:
hcw01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
O3303_11890 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
WBA40530
UniProt:
A0ABY7LP78
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All DBs
Position
complement(2784909..2785712)
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AA seq
267 aa
AA seq
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MSTTLHFHKYQGTGNDFVMLDDRAETFDAADHALVRHLCDRRRGIGADGLILLRNHPEYD
FEMVYFNADGHLGSMCGNGGRCTVAFARQLGVIETETRFLAADGPHEARIDADGTVHLRM
QDVAGQQELENLGVFLDTGSPHVVRLQAAGTLAELNVFAEGRAIRYGELFREKGTNINFV
EAPAAPGQPWQVRTYERGVEDETLSCGTGVTAVALAASQHGATSPVHLRTPGGDLRVTFQ
TQPDGSFQHVYLIGPATRVFEGRIDVA
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccacgctgcacttccacaaataccagggcaccggcaacgacttcgtgatgctg
gacgaccgcgccgaaaccttcgatgccgccgaccacgcgctggtgcgccacctctgcgac
cggcgccgcggcatcggcgccgatggcctgattctgctgcgcaaccacccggagtatgat
ttcgagatggtgtatttcaacgccgacggccacctgggctcgatgtgcggcaacggcggg
cgctgcaccgtggcctttgcccggcagttgggcgtcatcgaaaccgaaacccgcttcctg
gccgccgacggcccccacgaagcccgcatcgacgccgacggtaccgtacacctgcgcatg
caggacgtagccgggcagcaggagttggaaaacctgggcgtgttcctcgataccggctcg
ccgcacgtggtgcgtctgcaggcagccggcacgctggccgagctgaacgtgtttgccgaa
ggccgcgctatccgctacggcgagctgttccgcgagaaaggcaccaacatcaacttcgtg
gaggcgcccgccgcgcccggccagccctggcaggtgcgcacctacgagcggggcgtggaa
gacgaaaccctgagctgcggcaccggcgtcacggccgtggcgctggccgcttcgcagcac
ggcgccaccagccccgtgcacctgcgcacccccggcggcgacctgcgcgtaaccttccag
acccagcccgacggctcgttccagcacgtctacctcatcggccccgccacgcgggtgttt
gagggaagaatagatgtagcatag
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