Hymenobacter canadensis: O3303_13830
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Entry
O3303_13830 CDS
T09156
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hcw
Hymenobacter canadensis
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hcw03009
]
O3303_13830 (rimO)
Enzymes [BR:
hcw01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
O3303_13830 (rimO)
Ribosome biogenesis [BR:
hcw03009
]
Prokaryotic type
ribosomal protein modification factors
O3303_13830 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WBA40898
UniProt:
A0ABY7LPT4
LinkDB
All DBs
Position
complement(3207375..3208688)
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AA seq
437 aa
AA seq
DB search
MKVRSQQANKVNVITLGCSKNIVDSEVLMGQLRANQFEVTHEAEKSDANIVIINTCGFID
NAKQESIDTILRYADEKEAGRLDKLYVTGCLSQRYKDDLEVEIPQVDAFFGTLELPQLMK
TLEADYMHELVGERLLTTPKHYAYFKIAEGCNRPCSFCAIPLMRGKHMDRPIEDLVKEAN
RLASMGTKELILIAQDLTYYGLQHYGERKLADLLRNLSDVNGIDWIRLQYAYPSQFPMDA
LDVMAERDNICKYLDMPLQHISDNMLKTMRRGISKRRTVELVDTIRQRVPGIALRTTLIA
GHPGETQQDFEDLYNFVEETRFDRLGIFTYSHEDNTHSYTLEDDVPAEVKQDRADQIMEL
QQGISMELNEERVGQTHKVLFDRKESGYFVGRTQYDSPEVDNEVLVPATKDTYVRLGDFA
QVEITEASDFDLYGKLV
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaagaagccagcaggccaataaagtcaacgtcatcaccctcggctgctccaag
aacatcgtggactcggaggtgctcatgggccagcttcgcgccaaccagtttgaggtgacg
cacgaagccgaaaagagcgacgccaacatcgtcatcatcaacacctgcggctttattgat
aatgccaagcaggaaagcatcgacaccatcctgcgctacgccgacgagaaggaagccggc
cgcctggacaaactctacgtgacgggctgcctctcgcagcgctacaaggatgacctggaa
gtggaaatcccgcaggtagacgccttcttcggcaccctggagctgccgcagctgatgaaa
acgctggaggccgactacatgcacgagctggtgggcgagcggctgctgaccacgcccaag
cactacgcctacttcaagattgccgagggctgcaaccgcccctgctcgttctgcgccatc
ccgctcatgcgcggcaagcacatggaccgccccatcgaggacttggtgaaggaggccaac
cgcctcgcctccatgggcaccaaggagctgattctgattgcccaggatctgacctactac
ggcctgcagcactacggcgagcggaagctggccgacctgctccgcaacctgtccgacgtg
aacggcatcgactggattcggctgcagtacgcctacccctcgcagtttccgatggatgcg
ctggacgtaatggccgagcgggacaatatctgcaagtacctggatatgccgttgcagcat
atttcggataacatgctgaaaaccatgcgtcgcggcatcagcaagcgccgcaccgtggag
ttggtggacaccatccggcagcgcgtacccggcattgcgctgcgcaccacgctcattgcc
ggccaccccggcgaaacccagcaggattttgaggacctctacaacttcgtggaggaaacc
cgcttcgaccggctgggcatcttcacctactcgcacgaggacaacacgcattcctatacc
ttggaagacgacgtgccggccgaagtaaagcaggaccgcgccgaccagattatggagctg
cagcagggcatttcgatggagctgaacgaggagcgcgtgggccagacccacaaggtgctc
ttcgaccgcaaggaaagcggctacttcgtgggccgcacccagtacgactcgcccgaagtg
gacaacgaagtgctggtgcccgccaccaaagacacctacgtgcgcctcggcgacttcgcc
caggtggaaatcacggaagcctccgacttcgatttgtacggcaagctggtgtag
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