Hymenobacter canadensis: O3303_13895
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Entry
O3303_13895 CDS
T09156
Name
(GenBank) TonB-dependent receptor
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
hcw
Hymenobacter canadensis
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcw02000
]
O3303_13895
Transporters [BR:
hcw02000
]
Other transporters
Pores ion channels [TC:
1
]
O3303_13895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarbopepD_reg_2
Plug
CarboxypepD_reg
STN
MetallophosN
Big_1
TTR_TEN1-4
Motif
Other DBs
NCBI-ProteinID:
WBA40911
LinkDB
All DBs
Position
complement(3221277..3224549)
Genome browser
AA seq
1090 aa
AA seq
DB search
MNPRLPFPRTVRDLKRAALLQPLCLTLLSGMAAAHPSAAQPSLNQPISLQASGETVAAVL
SKIERQTDFRFQYSRQLIQAGRRVSIEASGQPLSEVLHVLLDPLRIAYEPMDSGIILKPA
AAADVPVTGRVLDEKGAGLPGVNVVVKGTSNGTQTDPDGRYTITAPDTGTLVFSFIGYTS
QEVAVGGRTTVDVNLAPDATALSEVVVVGYGTQRKTDLTGAVARVESAEIVNQPVQTPTQ
ALQGKTSGVQIISDGAPNSQPRVRIRGTGTLLAGAEPLYVVDGVQTTDIRNLSNADIETI
DVLKDASASAIYGVRGANGVIIVTTKKGKQGKPVLSYNNTVGFKQAANLVEMADAAQYTS
YLRDTSPTTTIPDNPADTDWYDQVLRRATYQNHNLAVSGANESVRYYFSGNILQDDGLAI
QNKFSRLTVRSNTDFTISPKFSVNSQASFSRANTRDVNFAAAYQDAYRAAPVITAKEGGR
YGNTSAFGNVGNPLLDIEKNNNRSYENRLQGNVGVNFIPIEGLTLRSAINLDLNYDNRRV
YDYQYLNDEVTFLRAGGNQRNQQSTLNVTQINRTRYLWENTATYQRTFADKHALTLLAGT
VTEEGNTNSLSGQRRNVPEDPSQWYLSTGDPNTSVNGSPDLNKDRRLSFLGRINYAFADK
YLFTTNLRYDGTSRFNSSQRWGLFPSVGLGWILTEEGFLKDQSVLSFLKLRASFGQLGND
QIDPTAYITTAETNIPYVFNGQPVLGAVINQIKDRDVRWEVTTEYDAAVEFALLDNHLSG
ELTYYSKKTTDALIPVNIPALFGDPNNQYITNAADISNKGVEASLTWRNTVGEKLSYNFG
VNATFNKNRIENLNGGQALFGGANNVTRSDNGVAAGSFYVLDAVGVFQSQAEIDAYPRYT
FFTPRPGDLKYADSNGDGTVDLRDRIYAGSYQPPMYFGINGGLTYSGLDFSFVFSGNMNN
DVYNRKKQATGQNTDNIEADFANSRWTATNPSQSDPFAIRNNTPNSTYFIESGSYIRLNN
LVLGYTLPGDLTKRAFISSLRIYATAQNLLTITNYSGFTPELPGGPLDSGIEATTYPTSR
TLALGLNVNF
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgaacccacgcctaccatttccccgcaccgtccgtgacctgaagcgggcggcgctgctg
cagccactgtgcctgacgctgctcagcggcatggccgccgcccatccttccgcggcccag
ccctccctcaaccagcccatttcgttgcaggccagcggcgaaaccgtggccgcggtgctc
agcaagatcgagcgccagaccgacttccggtttcagtacagccgccagctgattcaggcc
gggcgccgcgtatccattgaagccagcgggcagccgctgagcgaggtgctgcatgtgctc
ctcgacccgctgcgcattgcctacgagcccatggacagcggcatcatcctgaagccggcc
gccgccgccgacgtgccggtaaccggccgcgtgctggacgagaaaggcgccggcctgccc
ggcgtgaacgtggtggtgaaaggcaccagcaacggcacccagaccgaccccgacggccgc
tacaccatcacggcccccgacacgggcacgctggtgttcagcttcatcggctacacctcg
caggaggtggccgtgggcggccgaacgacggttgacgtgaacttggcccccgatgctacc
gccctgagcgaggtggtggtggtgggctacggcacccagcgcaaaaccgacctgaccggc
gccgtggcccgggtggagtcggcggaaattgtgaaccagccggtgcagacgcccacgcag
gcgctgcagggcaaaacctcgggcgtgcagatcatttccgacggggcacctaactcccag
cccagagtgcgcatccggggtacgggcacgctgctggccggtgccgagccgctctacgtg
gtagatggcgtgcagaccaccgacatccgcaacctgagcaacgccgacatcgagacgatt
gacgtgctcaaggatgcctcggcgtcggccatctatggcgtacgcggggccaacggcgtc
atcatcgtgaccaccaaaaagggcaagcagggcaagccggtgctcagctacaacaacacc
gtgggcttcaagcaggccgccaacctggtggagatggccgacgccgctcagtataccagc
tacctgcgcgacacctcgcccacgaccaccataccggacaaccccgccgacaccgactgg
tacgaccaggtgttgcgccgcgccacctaccagaaccacaacctggccgtgtcgggggcc
aatgagagcgtgcgctactacttcagcggcaatattctgcaggacgacggcctggccatc
cagaacaagttctcgcgcctcaccgtgcgctccaacaccgatttcaccatctcgcccaag
ttcagcgtcaactcgcaggcctcgtttagccgggccaacacgcgcgacgtgaactttgcg
gccgcttaccaggatgcctaccgcgccgcgccggttattacggccaaggaaggcgggcgc
tacggcaatacgtcggctttcggcaacgtgggcaacccgctgctcgatatcgagaaaaac
aacaaccgctcctacgaaaaccgcctgcagggcaacgtgggcgtgaatttcattccaatc
gaaggcctcacgctgcgctcggccatcaacctggacctgaactacgacaaccgccgtgtc
tacgactaccagtacctcaacgacgaggtgacgttcctgcgggccggcggcaaccagcgc
aatcagcagagtacgcttaatgtcacgcagatcaaccgcacgcgctacctctgggaaaat
acggccacctaccagcgcaccttcgccgacaagcacgccctgacgctgctggccggtacc
gtgaccgaggaaggcaacaccaactcgctgtcggggcagcggcgcaacgtgcccgaagac
cccagccaatggtacctgagcaccggcgacccgaacacgtcggtgaacggctcgcccgac
ctcaacaaggaccgccgcctctcgtttctgggccgcatcaactacgccttcgccgacaag
tacctgttcacgaccaacctgcgctacgacggcacgtcccggttcaattccagccagcgc
tggggcctgttcccgtcggtgggtttgggctggattctgaccgaggaaggcttcctcaaa
gaccagagcgtgctgagcttcttgaagctgcgcgccagcttcggccagctcggcaacgac
cagattgaccccacggcctacatcaccacggccgaaaccaacatcccgtacgtgttcaac
gggcagccggtgctgggcgccgtcatcaaccagatcaaggaccgcgacgtgcgctgggag
gtgacgacggagtatgacgcggccgtggagtttgcgctgctcgacaaccacctgagcggc
gagctgacctactacagcaagaaaaccaccgacgcgctgattccggtgaacatcccggcc
ctgttcggcgaccccaacaaccagtacatcaccaacgccgccgacatcagcaacaagggc
gtggaagcctcgctgacctggcgcaatacggtgggggagaagctcagctacaacttcggg
gtgaatgccaccttcaacaagaaccgcatcgaaaacctgaacggcggccaggccctgttc
gggggcgccaacaacgtgacccgttccgacaacggcgtggcagccggttcgttctacgtg
ctcgacgccgtgggcgtgttccagagccaggccgaaatcgacgcctacccgcgctacacg
ttcttcacgccccgccccggcgacctgaagtatgctgattccaacggcgacggcaccgtg
gacctgcgcgaccggatctacgccggctcctaccagccgccgatgtatttcggtatcaac
ggtggcctaacgtatagcgggctggacttctcgttcgtgttcagcggcaacatgaacaac
gacgtgtataaccggaagaagcaggccaccggccagaacaccgacaacatcgaggccgac
ttcgccaacagccgctggaccgccaccaacccctcgcagtcggaccccttcgccattcgc
aacaacacgcccaactccacctactttatcgagtcgggctcttatatccggctcaacaac
ctggtgctgggctacaccctgccgggtgatctgacgaagcgggcctttatttcgtcgttg
cgcatctacgccacggcccagaacctgctgaccatcaccaactactcgggcttcacgccg
gagctgccgggcgggcccctggactcgggcatcgaggccaccacctatccaaccagccgc
acgcttgcgctgggactgaacgtcaacttctaa
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