Hymenobacter canadensis: O3303_14215
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Entry
O3303_14215 CDS
T09156
Name
(GenBank) translocation/assembly module TamB
Organism
hcw
Hymenobacter canadensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
T2SSN
Motif
Other DBs
NCBI-ProteinID:
WBA40974
LinkDB
All DBs
Position
3316037..3321199
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AA seq
1720 aa
AA seq
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MAFVLLLLIGVVVALQFPSVQDYAAGKAAGYLQGKIGTEVRIAKFRTDFKHALSLEGVYI
EDQQGDTLLSVGRLGVDLDLWALTKSEINLKELELNDGRLAISRTLPDSVSNYDFIVNAF
TTADTATTAPADTTAGFKYNIGDLRLTNIRLTYDDQVEGMAVRTKVGELAVTMDAVDVDQ
SIYKVDEATLRNTAISIAQTKTAPPDTAVAEPLALTFGLNKAVLSNVSLTYKNDPSAQFI
STRVGEAEITADNIDLINSRVALNTVKLRNTSIAYAQNENVPVEKRLVNPAEVVRDLNDA
VEGATGQPSNWVVSLNRSDIRGVDVAFDNFDEPKQRTRLPAMDYNHLKFTDLVLNVENLR
YSENSTTGRINQLAGREQSGFRIDSATADVVFDSVQTRLTNLDLITPHTRIRQTLGMRYK
SLDALADTRQLPNLGIEGDLRNVRLGFRDILYLAPDLAGTPPFTTGPNQSVLLSGRVSGR
VGDMRIQGLEFVGFRNTIVKASGRIQGLPETDRRLYTDLRIQQFTTSEADIRMLAPKGTI
PPGYNIPPRMTVAGTFRGRPSAMLFDTDLRATTTYGNVAAKIDLGAGPKGQEPITAVFST
QNLNVGRILNDPTIGTVTASGRLNGRGGLDPNLLRGQLTANVQRATYNGYTYRGITAKVD
IDRNRYVIDAKSRQDPNLNLDLLATVNLRDANNPSYEVQRLNLRGANLTALGFYTGGDLR
VQGDLTANLSGSDANSINGTFSGRNIIIVRDNQTIPLDSVSGRIVQRPGRTEVVFNSNVA
DFNLQGNTRLGDLATVLQEHIDRYFDLPGVRYRPSAAYRQFTFEANVKNTTLVQKLVPDL
KQLTPFKLTGGFDSRAANLTLNTRIPRIVYMGYALDSLKFNVSSDAQKLDYALGLRQISQ
DTTLRIPNPTLAGSVQNNQIGTRLRIAESDSAERLNMAGVLREIGSGDAYSFSFDPKLML
DRVAWDVTPGNELRYTTATGAIFANNLEFSRNNRSLKLQTLPGAQYPLQLNMQNLELNGL
ARAAGLQDSLVAGTLNGQALALSLGQPKQAFTADATLANLVYNKTVVGDVTLKATNPTPN
RYNVDARLTNAQGADVRAVGYYLATPPDPIRFDVTVNRFDLKMAEPFSAGQLREGLGGVT
GSIVVTGTAAQPIINGALTTTADAGLTLTQLGSDFRMPNQTVTFNPQNIAFNNFTVLDSL
GNKAVVDGRIIVPNYADVNSYRFNLNATTEDFLAINSRPTDNELFYGKLVLDSDTRISGN
LTLPVLNTNVLVEKGSDLTIVVPNDEAGLVATDGIVEWIDKSAPVDTMLARQLALDSAKT
AAGYDITARITVRDNTPFTLVIDPISGDNLKVRAEGTLNTAIDPSGSISLTGRLDVTDGA
YNMSLYDLASREFKIGSDSYIVWSGDPYNAQLNIAAIYNVKAAPAELLAAQGVADETLSA
VGRNQLPFQVFLNVTGELLKPTIGFDIRLPEESRSELRGPIEARLAQLRQPSEESELNKQ
VFSLMVLNRFMTDDPFKSSGGNLVTDQLRGSASQVLTQQLNNLTGSYLSNLGVELGVNSY
ADYSSGAEKTRTDLNVAVRRQLLNNRLTVRLGTDVPLGGGNQASNGQNQAGISSFAGDVS
IEYNVLANGRIRLRAFRNNAYGDIDGQFVRTGASLIFQRDYRDLADLFKGIDKEVKEEVK
QNRRRQRQDKKDAQDSTQTVTSEPRRDSTRTAQRPTTSGR
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
gtggcgttcgtgctgctgctccttataggagtggtggtggcgctgcagtttccatcggta
caggactacgcggccggcaaagcggccggctacctgcaaggcaaaatcggcaccgaagta
cgcattgcgaagtttcgcaccgatttcaagcacgcgctcagcctggaaggcgtgtacatt
gaggaccagcagggcgacacactgctgtcggtgggccgcttgggcgtggatctggacctg
tgggccctcaccaagtcggaaatcaacctgaaggagctggagctcaacgacggccgtctg
gccatcagccgcacgctgcccgacagcgtgagcaactacgacttcatcgtcaatgccttc
acgacggccgacactgccactaccgcgccggcagataccaccgcgggcttcaagtacaac
attggcgatttgcgcctgaccaatatccgcctcacctacgacgaccaggtggagggcatg
gcggtgcgcacgaaagtgggcgagctggccgtcaccatggacgccgtggacgtggatcag
tcgatttataaggtagatgaggccacgctgcgcaacacggccatcagcatcgcccagacc
aaaaccgccccgcccgatacggccgtggccgagccgctggctcttacgttcgggctgaac
aaggccgtgctcagcaacgtcagcctgacctataagaacgacccgtcggcgcagtttatc
agcacccgcgtgggcgaggccgaaattacggccgacaacatcgacctgatcaactcccgc
gtggccctgaacacggtgaagctgcgcaacaccagcattgcctacgcccagaacgaaaac
gtaccggtggaaaagcgcctcgtgaaccccgccgaggtggtgcgcgacctgaacgacgcc
gtggaaggagccaccggccagcctagcaactgggtggtgtcgctgaaccgctccgacatc
cggggcgtggatgtagccttcgacaacttcgacgagcccaagcagcgcacccgcctgccg
gccatggactacaatcacctcaagttcacggacctggtgctgaacgtggagaacctgcgc
tactccgaaaacagcaccaccggccgcatcaaccagctggccggccgcgagcagagcggc
ttccgcatcgactcggccacggccgacgtggtgttcgactcggtgcagacccgcctcacc
aacctcgacctgattacgccgcacacccgcatccgccagacgctgggcatgcgctacaag
agcctcgacgcgctggccgacacccgccaactgcccaacctgggcatcgagggcgacctg
cgcaacgtgcgcctcggcttccgcgacatcctgtacctggcccccgacctggccggcacg
ccgccgttcaccaccggccccaaccagtcggtgctgctgagcgggcgcgtgagtggccgc
gtgggcgacatgcggattcaggggctggagtttgtgggcttccgcaacaccatcgtgaag
gccagcggccggatccagggcctgcccgaaaccgaccgccgcctctacaccgacctgcgc
atccagcagttcactacctccgaggccgatatccggatgctggccccgaaaggcacgatt
ccgcccggttacaatattccgccccggatgacggtggccggcaccttccggggccgcccc
tcggccatgctgtttgacaccgacctgcgcgctaccaccacctacggcaacgtggcggcg
aagattgacctcggcgccggccccaaaggccaggagccgattacggccgtgttcagcacc
caaaacctgaacgtaggccgcatcctcaacgaccccaccatcggcaccgtcacggccagc
ggccgcctaaacggccgcggcggcctcgaccccaacctgctgcgcgggcagctcacggcc
aacgtgcagcgcgccacctacaacggctacacctaccgcggcatcacggccaaggtggac
atcgaccgcaaccgctacgtcatcgacgccaaaagccggcaggaccccaacctgaacctc
gacctgctggccaccgtgaacctgcgcgacgccaacaaccctagctacgaagtgcagcgc
ctgaacctgcgcggcgccaacctcacggccctgggcttctacaccggcggcgacctgcgc
gtgcagggcgacctgaccgctaacctcagcggctccgacgccaacagcatcaacggtacg
ttctcgggccgcaacatcatcatcgtgcgcgacaaccagactattccgctggactcggtg
agtggccgcattgtgcagcgccccggccgcaccgaggtggtgttcaactccaacgtggcc
gacttcaacctgcaaggcaacacccgcctcggcgacctggccacggtgctgcaggagcac
attgaccggtattttgatttgcccggcgtgcgctaccggccgtcagcggcctaccggcag
ttcacgttcgaggccaatgtgaaaaataccacgctggtgcagaaactggtgcccgacctc
aagcagctcacgccgttcaagctcacgggcggcttcgacagccgcgccgccaacctcacg
ctcaacacccgcattccgcgcattgtgtacatgggctacgcgcttgactcgttgaaattc
aacgtcagctccgatgcgcagaagctggactacgcgctgggtttgcgccagatcagccag
gacaccacgctgcgcatccccaacccgaccctggccggcagcgtgcaaaacaaccagatt
ggcacccgcctgcgcattgccgagtcggacagtgccgagcgcctgaacatggccggcgtg
ctgcgcgaaattggcagcggcgacgcttactctttcagcttcgaccctaaactaatgctg
gaccgcgtggcttgggacgtgacacccggcaacgagctgcgctacaccaccgctaccggc
gccatcttcgccaacaacctggagttcagccgcaacaaccgcagcctgaagctccagacg
ctgcctggcgcgcagtatccgctgcagctgaacatgcagaacctggagctgaacggcctg
gcccgcgccgccggcctgcaggattcgctggtggctggcacgctcaacggccaggccctg
gcgctcagcctgggccagcccaagcaggcattcacggccgacgccacgcttgctaacctg
gtgtacaacaaaaccgtggtgggcgacgtgaccctgaaagccaccaaccctactcccaac
cgctacaacgtagacgcccgcctcaccaacgcccagggcgccgacgtgcgggccgtgggc
tactacttggccacgccgcccgacccgattcggtttgatgtgaccgtaaaccggtttgac
ctcaagatggccgagccgttttcggccgggcaactacgcgaaggcctgggtggcgtgacg
ggcagcatcgtggtgacgggcacggccgcccagcccatcatcaacggggccctcaccacc
actgccgatgccggcctgacgctcacccaactgggctccgacttccgcatgcccaaccag
acggtgacgttcaacccgcagaacattgccttcaataacttcacggtgctggactcgctc
ggcaacaaggccgtggtggatggccgcatcatcgtgcccaactacgccgacgtcaactcc
taccgcttcaatctcaacgccaccaccgaggacttcctggccatcaacagccgccctacc
gacaacgagctgttctacggcaagctggtgctggactccgatacgcgcatcagcggtaac
ctgacgctgcccgtgctcaacaccaatgtgctggtggaaaaaggatccgacctgaccatt
gtggtgcccaacgacgaagccggcttagtcgccaccgacggaattgtggagtggatcgac
aaaagtgcgcccgtcgatacgatgctggcccggcagctggccctggattccgccaaaacc
gccgccggctacgacatcaccgcccgcatcaccgtccgcgacaacacgcccttcaccctc
gttatcgacccgatttccggcgacaacctgaaggtgcgggccgagggtacgctcaacacg
gccatagaccccagcggctccatcagcctcaccggtcgcctcgacgtgacagatggcgcc
tacaatatgtcgctctacgatctggcttcgcgcgaattcaagatcggctccgacagctac
attgtctggagtggcgacccgtataatgcccagctcaacattgccgccatctataacgtg
aaggcggccccggccgagctgctggccgcccagggtgtggccgacgaaacgctgagtgcc
gtaggccgcaaccagctgccgttccaggtgttcctgaacgtgaccggtgagctgctcaag
cccaccatcgggttcgatatccgcctgccggaagagtcccgctccgagctgcgcgggccc
attgaagcccgcctggcccagttgcgccagcccagcgaagagtcggagctgaacaagcag
gtcttctcgctgatggtgctcaaccgcttcatgaccgacgacccgttcaagagcagcggc
ggcaacctcgtgactgaccagctgcgcggctcggccagccaggtgctcacccagcagctc
aacaacctcacgggctcgtatctgtccaacctgggcgtggagctgggcgtgaactcctat
gctgattacagcagcggcgccgagaaaacccgcaccgacctcaacgtggccgtgcgccgc
cagctgctcaacaaccgcctcaccgttcgcctcggcaccgatgtcccgctgggcggtggc
aaccaagccagcaacgggcagaaccaggcgggcatcagctctttcgccggcgacgtcagc
atcgagtacaacgtgctggccaatggccggattcgcctgcgagctttccgcaacaacgcc
tacggcgacatcgacggccagtttgtgcgcaccggtgcctcgctcatcttccagcgcgac
taccgcgacttagctgacctgttcaagggcatcgataaggaggtgaaagaagaagtgaag
cagaaccgccgccgccagcgccaagacaaaaaagacgcgcaggattccacccaaaccgtt
acgtcggagccgcgccgcgactccacgcgcaccgcgcaacgccccactacctccggccgc
tag
DBGET
integrated database retrieval system
