Hymenobacter canadensis: O3303_14960
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Entry
O3303_14960 CDS
T09156
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hcw
Hymenobacter canadensis
Pathway
hcw00260
Glycine, serine and threonine metabolism
hcw00460
Cyanoamino acid metabolism
hcw00630
Glyoxylate and dicarboxylate metabolism
hcw00670
One carbon pool by folate
hcw00680
Methane metabolism
hcw01100
Metabolic pathways
hcw01110
Biosynthesis of secondary metabolites
hcw01120
Microbial metabolism in diverse environments
hcw01200
Carbon metabolism
hcw01230
Biosynthesis of amino acids
hcw01240
Biosynthesis of cofactors
hcw04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
O3303_14960
09102 Energy metabolism
00680 Methane metabolism
O3303_14960
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
O3303_14960
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
O3303_14960
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
O3303_14960
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
O3303_14960
Enzymes [BR:
hcw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
O3303_14960
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
DUF4660
Motif
Other DBs
NCBI-ProteinID:
WBA41113
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All DBs
Position
3481979..3483271
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AA seq
430 aa
AA seq
DB search
METQAPALVQDTAIFDLIEREKERQTHGIELIASENYVSEQVMRAQGSILTNKYAEGLPG
KRYYGGCEIVDQIEQLAIDRAKALFGVEWVNVQPHSGAQANAAVMLAILNPGDKILGFDL
SHGGHLTHGSPVNFSGKLYRPSFYGVEKETGLIDWEKVKETARREQPKLIICGASAYSRD
WDYQALREAADEVGALLLADISHPSGLIAKGLLNNPFQHCHIVTTTTHKTLRGPRGGLIM
LGKDFENPFGLKTPKGELRMMSALLDSGVFPGTQGGPLEHVIGAKAVAFGECLSDAYTDY
THQVIRNAQALASGFVERGYQIISGGTDNHLMLIDLRSKGLTGKLAENTLVKADITINKN
MVPFDDKSPFVTSGMRIGSAAVTTRGLKEPDMARIVDLIDQALLHHDDDAHLLRVRGQVN
EWMQQFPLFA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcaagcccccgccctcgtgcaagacaccgccattttcgacctgattgagcgc
gagaaagagcgccagacccacggcattgagctcattgcctccgaaaactacgtttcggag
caggtgatgcgggcccagggctctattttgaccaacaaatacgccgagggcctgcccggc
aagcgctactatggtggctgcgaaatcgtggaccagatcgagcaactggccattgaccgc
gccaaagcgctgttcggcgtggagtgggtgaacgtgcagccgcactccggcgcccaggcc
aacgccgccgtgatgctggccatcctcaaccccggcgacaaaattctgggctttgacctc
agccacggcggccacctcacccacggctcgccggtcaacttctcgggaaagctctaccgg
ccgtcgttttatggcgtggagaaggaaaccggcctcatcgactgggaaaaagtaaaggaa
accgcccgccgcgagcagcccaaactcatcatctgcggcgcctcggcctactcccgcgac
tgggactaccaggccctgcgcgaagccgccgacgaagtgggggcgctattgctagctgat
atttcgcacccttcgggtctgattgccaagggcttgctgaacaatccgttccagcattgc
cacatcgtcacgacgaccacgcacaagacgttgcgcggcccacgcggcggcctcatcatg
ctgggtaaggacttcgaaaaccccttcggcctgaaaacgccgaaaggcgaactgcgcatg
atgtcggcgctgctggactcgggggtgtttccgggtacgcagggcggaccgctcgagcac
gtcatcggcgccaaagctgtggccttcggcgagtgcctctccgacgcctacaccgactac
acccaccaggtaatccgcaacgcccaggccctggccagtggcttcgtggagcgcggctac
cagatcatctcgggcggcaccgacaaccacctgatgctcattgacctgcgcagcaaaggc
ctcaccggcaagctggccgaaaacaccctcgtgaaggccgacatcaccatcaacaaaaac
atggtgcccttcgacgacaagtcgcccttcgtgaccagcggcatgcgcatcggctcggcc
gctgtcaccacccgcggcctcaaggaacccgatatggcccggatcgtagacctgatcgac
caggccctgctgcaccacgacgacgacgcccacctgctgcgcgtgcgcggccaggtaaac
gagtggatgcagcagtttccgctgtttgcctag
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