Hymenobacter canadensis: O3303_15030
Help
Entry
O3303_15030 CDS
T09156
Name
(GenBank) class I SAM-dependent rRNA methyltransferase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
hcw
Hymenobacter canadensis
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hcw03009
]
O3303_15030
Enzymes [BR:
hcw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
O3303_15030
Ribosome biogenesis [BR:
hcw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
O3303_15030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUA_3
Methyltrans_SAM
Cons_hypoth95
MTS
FtsJ
Methyltransf_31
Methyltransf_15
PUA
TRM5-TYW2_MTfase
UPF0020
TRM
Methyltransf_25
UPF0113
PrmA
Motif
Other DBs
NCBI-ProteinID:
WBA41126
LinkDB
All DBs
Position
3497608..3498798
Genome browser
AA seq
396 aa
AA seq
DB search
MTAAIVTLKPGKDQSLRRRHPWVFSGAIGRMQGEVTEGEVVTVQAPNGEVLGVGHYAPGS
IAVRMLDFGPNAQLPDAAFWEARLRNAYQLRQGLGLTGTGNTDVYRLTHAEGDGLPGLII
DVYGDTAVVQAHSAGMYKARPLIAEALQAVIPGLRAIYDKSAETVPAKAAPGAQNGYLFG
SSSGQEHVVHENGQPFAVDWETGQKTGFFIDQRDNRSLLARYAPGRRVLNTFCYTGGFSS
YALQAGAELVHSVDSSKRAIELTERNAALTGLESKHAAYAEDVFSFMKNSQQEYDLIVLD
PPAFAKHLSARHNALMGYKRLNAAGIRQIAPGGLLFTFSCSQVVSPELFEGAVLAAAIEA
GRPARILHRLTQPADHPVSLFHPEGAYLKGLVLAVE
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgccatcgtcaccctcaaacccggaaaagaccaatccctgcgccgccgccac
ccgtgggtgttttcgggcgctattggccgcatgcagggcgaagtgaccgaaggcgaagtg
gtgacggtgcaggctcccaacggcgaagtactgggagtgggccattacgcccccggctcc
attgccgtgcgcatgctcgatttcggccccaatgcccagctgcccgacgcggccttttgg
gaagcccgcctgcgcaacgcctaccagctgcgccagggtctgggcctgacgggcaccggc
aacaccgacgtgtaccgcctcacccacgccgagggcgacggcctgcccggcctcatcatc
gacgtgtacggcgacacggccgtggtgcaggcgcacagcgcgggcatgtacaaggcccgc
ccgctcattgcggaagccctgcaggccgtcattccgggtttgcgcgccatctacgacaag
agcgccgaaaccgtgccggccaaggctgccccgggtgcccagaacggctacctgtttggc
agcagcagcgggcaggagcacgtggtgcacgaaaacggccagccgttcgccgtggattgg
gaaacggggcagaaaaccggcttcttcattgatcagcgcgacaaccgcagcctgctggcc
cgctacgcgcccggccgccgggtgcttaacacgttctgctacaccggtggcttcagctcc
tacgcgctgcaggccggcgccgagctggtgcactccgtggacagctccaagcgcgccatc
gagctgacggagcgcaacgccgccctcaccggcctcgaaagcaagcacgccgcctacgcc
gaggacgtgttcagtttcatgaaaaacagccagcaagaatacgacctcatcgtactcgat
ccgccggccttcgccaagcacctttcagcccgccacaacgccctgatgggctacaagcgc
ctgaacgcggccggcatccggcagattgcgcccgggggcttgctgttcacgttcagctgc
tcgcaggtggtgagccccgagctgtttgagggcgccgtgctggccgccgccatcgaggcc
ggccggccggcccgcatcctgcaccgcctcacccagcccgccgaccaccccgtaagcctt
ttccaccccgaaggcgcttatctgaaaggtttggtgctggccgtggagtag
DBGET
integrated database retrieval system
