Hymenobacter canadensis: O3303_16380
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Entry
O3303_16380 CDS
T09156
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
hcw
Hymenobacter canadensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
GAF
Sigma54_activ_2
GAF_2
GAF_3
AAA_5
HTH_8
AAA_2
AAA
Mg_chelatase
AAA_16
AAA_3
bpMoxR
AAA_7
Motif
Other DBs
NCBI-ProteinID:
WBA41384
LinkDB
All DBs
Position
complement(3820238..3822325)
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AA seq
695 aa
AA seq
DB search
MPQSEESLLLYLNEAIATTRSKDKLFQLVTEKLRLIFPFDMIAIITLDSAQRYKRLFMRD
YLGEVPYPMPQNAAGMMPVENSPTELFVRDPRVQQIDIRELTADYPDFMPFVLLGQRKVH
YLTVVPLRTGGQLIGLLCMAARRPPALLPADLALLEKIGSLVAVAVNNALAFEEIAWRER
EKSVQLSVTNVLLSSKDRQALFQTVAEEINRIVPLDYFGLRIQRRETATEGFAEFAKQPD
GTFAPLAESRWDGVADREQMQRETFGIFSQPLLLTGPDYELAARRYRMLQYTMEKNGTRA
MLGVPLWTDDTQAAVLVLASRRPDAFTTADLDLVAGLAPQITLAMRNLFAFEQIEALRAQ
LEREKTYLLDEINTTAKFEDFIGTSPVMQLVQTRIRQVAPTDTTVLIQGETGTGKELVAR
ALHNLSPRKERALIKLNCAALPAQLIESELFGHEKGAFTGAHDRRIGKFELADGGTIFLD
EVGELPLDLQAKLLRVLQEKEFERIGGRRVIRADVRVIAATNRVLEEEVAAGHFRADLYY
RLNVFPIRLPALRERTEDIEPLMRHFLERFTKQMGKPVRGLRERDLRALQQYGWPGNVRE
LEHVLEQAVIVSQGPFLEFQGFAAATQAAPAASEAGGPLKTLREQERDHILAALHRTGGR
VSGPNGAAVLLDINPKTLEARMKKLGIRRTVEAGE
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgccccaatcagaagagtcgctgctgctgtacctcaacgaggccattgctaccacgcgc
agcaaagacaagctctttcagttggtaacggagaagctgcggctgatttttccgttcgac
atgattgccatcatcacgctcgacagcgcccagcgctacaagcggctgttcatgcgtgac
tacctgggcgaggtaccctacccgatgccgcaaaatgcagccggcatgatgccggtggaa
aactccccgactgagctgttcgtgcgcgacccacgggtgcagcagatcgacatccgggag
ctgacggcggactacccggattttatgccgtttgtactgctggggcagcgcaaggtgcac
tacctgacggtcgtgccgctgcgcaccggcggccagctgatcgggctgctgtgcatggcg
gcgcggcgccccccggccctactgcctgccgacctggcgctgctggaaaaaatcgggagc
ctggtggcagtggccgtgaacaatgccctggccttcgaggaaatagcctggcgcgagcgg
gaaaaatcagtgcagctgtcggtgaccaacgtgctgctgagcagcaaagaccggcaggcg
ttgtttcagacggtggcggaggaaatcaaccgcatcgtgccgctcgactacttcgggctg
cgcattcagcggcgggaaacggccacggagggcttcgcggagtttgccaagcagcccgac
ggcacgtttgcgccactggccgaaagccgctgggacggggtagccgaccgcgagcagatg
cagcgcgaaaccttcggcatcttctcgcagccgctgctgcttaccggccccgactacgag
ctggccgcccgccgctaccgcatgctgcagtacacgatggagaaaaacggcacccgcgcc
atgctgggcgtgccgctctggaccgacgacacccaggccgccgtactggtgctggccagc
cgccgccccgatgccttcaccaccgccgacctggacctggtggcgggcctagcgccgcaa
atcacgctggccatgcgcaacctgtttgcctttgagcagattgaggccctgcgcgcccag
ctggaacgcgaaaaaacctacctgctcgacgaaatcaacaccacggccaagtttgaggac
ttcatcgggaccagcccggtgatgcagctggtgcagacccgcatccgacaggtggcgcct
accgatactacggtgcttattcagggtgaaaccggcaccggcaaggagctggtagcgcgg
gccctgcacaacctgtcgccgcgcaaggagcgcgccctcatcaaactcaactgcgccgca
ctgccggcccagctcatcgaaagcgagctatttgggcacgagaaaggtgcgtttacggga
gcccacgaccggcgcatcggtaagtttgagctggccgatggcggcaccattttcctggat
gaagtgggcgagctaccgcttgatttgcaagctaagctgctgcgggtgctgcaggaaaag
gagtttgagcgcatcggcgggcggcgcgtcatccgggctgatgtgcgcgtcattgcagct
actaaccgcgtgctggaagaggaagtggccgccgggcatttccgcgccgacctctactac
cgcctcaacgtgtttccgatccggctgccggctttgcgcgagcgaaccgaagacattgag
cccctgatgaggcattttttggagcggttcaccaagcagatgggtaagcccgtgcgcggc
ctgcgtgagcgggacctgcgcgctctgcagcagtacggttggcccggcaacgtgcgcgaa
ctggagcacgtgctggaacaggccgtgatagtcagccaggggccgtttctggagtttcag
ggctttgcagcggccacccaggccgcgcccgccgcatccgaagccggcggcccactcaaa
accctgcgcgagcaggagcgcgaccatatcctagcggcgctgcaccgcaccggcggccgg
gtcagcggccccaacggcgccgccgtcctgctcgacatcaaccccaaaacccttgaagcc
cgcatgaaaaagttgggtatccggcgcacggtggaagcgggtgagtga
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