KEGG   Hymenobacter canadensis: O3303_16570
Entry
O3303_16570       CDS       T09156                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
hcw  Hymenobacter canadensis
Pathway
hcw03030  DNA replication
hcw03410  Base excision repair
hcw03420  Nucleotide excision repair
hcw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:hcw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    O3303_16570 (polA)
   03410 Base excision repair
    O3303_16570 (polA)
   03420 Nucleotide excision repair
    O3303_16570 (polA)
   03440 Homologous recombination
    O3303_16570 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hcw03032]
    O3303_16570 (polA)
   03400 DNA repair and recombination proteins [BR:hcw03400]
    O3303_16570 (polA)
Enzymes [BR:hcw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     O3303_16570 (polA)
DNA replication proteins [BR:hcw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     O3303_16570 (polA)
DNA repair and recombination proteins [BR:hcw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     O3303_16570 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     O3303_16570 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 HHH_2 HHH_5 HRI2_3H
Other DBs
NCBI-ProteinID: WBA41418
UniProt: A0ABY7LLT5
LinkDB
Position
complement(3863898..3866783)
AA seq 961 aa
MTPDAPAAQPHKLFLLDAFALIYRAHFAFSKNPRVNSKGLNTGAILGFTNTLVEVLQKEK
PTHIGVAFDAAKKTFRHEQYAEYKAQRQAMPEDIGLAIPYIKQIIKAFHIPILMVEGFEA
DDVIGTLARRAEAQGFGEVYMMTPDKDYCQLVTDCVKIYRPAFMGNAAEILDVAHVLQRF
EIERPEQVIDILGLQGDASDNIPGIPGIGEKTAKTLIQKYGSVENLIANVDQLKGKQQEN
VRNFAEQGLMSKELATIHLDVPIEFEADKLVLDQPDAEALRQLFDELEFRQLAARVLGGG
SPAGVSAAPVGRGARRPKAAEAQGSLFGSSSDAAVAIGAEEGETGEFGAPAGPRRTLQDV
PHQYHLMDTPELRASLLAFLLQQTEVSFDTETTGLDIMTARLVGLSFCWLPGEAYYVPVP
TDDHAATQALVDEFQPFFEAAHILKIGQNIKYDLTILKHYNVAINGPLFDTMLAHYLLEP
DMRHGMDVLAETYLHYTPVPITALIGPKGKNQKTMADLPPAEVSDYACEDADVTLQLKHV
FELLLKEVGLLDLLNEVENPLVPVLADIEYEGVKIDSSAMGEYSAELQGYIVDLEKQIFS
EAGQEFNIGSPKQLGEVLFDKMDIGKGKIKKTKTGQYATGEEILSQLAAENPIAALILEY
RQLSKLRSTYVEALPQLVNVADGRVHTSFNQAVTATGRLSSTNPNLQNIPIRTEKGREIR
KAFVPRDAGHVLLAADYSQVELRIMADFSGDKTMIEAFRQGLDIHTSTASKVFKVPLSEV
DSEMRRKAKTVNFGIIYGISAFGLAQRIGISRKEATDIIDTYFEEFSSVKQFMDNSINKA
RELEYATTLLGRRRYLRDINSRNATLRGYTERNAINAPIQGTAADIIKKAMINIHEWLRQ
EKLGTKMILQVHDELVFDAVQEEVAYITPKIKELMATALLLPHGVPLEVEVGTGRNWLQA
H
NT seq 2886 nt   +upstreamnt  +downstreamnt
atgactcccgacgcccccgctgcccagccccacaagcttttcctgctcgacgcctttgcc
ctgatttaccgcgcccactttgccttcagcaagaacccgcgcgtgaactccaagggcctc
aacaccggcgctattctgggcttcaccaacacactggtagaggtgctgcagaaggaaaag
cccacccacatcggcgtggcgttcgacgccgccaaaaagacgttccgccacgagcagtac
gctgagtacaaggcccagcgccaggccatgcccgaggatatcggcttggccattccctac
atcaagcagatcatcaaggctttccacattcccatcctaatggtggaaggtttcgaagcc
gacgacgtgattggcacgctggctcgccgcgccgaggcccagggcttcggggaggtgtat
atgatgacgcccgacaaggactactgccagctggtgacggactgcgtgaaaatctaccgg
ccggccttcatgggcaacgccgccgaaatcctggacgtggcgcacgtgctgcaacgcttc
gagattgagcggcccgagcaggtgattgacattctgggtttgcagggcgacgcctccgac
aatattccgggtattccgggcatcggggagaagacggccaaaacgctgattcagaagtac
ggctccgtcgaaaacctgattgccaacgtggaccagctcaagggcaagcagcaggagaac
gtgcgcaacttcgccgagcagggcctgatgagcaaggagctggccaccatccacttggat
gtgcccatcgagtttgaggccgataagttggtgctggatcagcctgatgccgaggcatta
cggcaactgttcgacgagctggaattccgccagctggccgcccgcgtgctgggcggcggc
agccccgccggcgtgagtgccgcgcccgtcgggcgtggggcgcgccgcccgaaagcggcc
gaggcccagggcagtctgttcggctcgtcgtcggatgcggccgtggctattggcgctgag
gaaggcgaaaccggcgagtttggggcgccggccgggccacgccgcacgctacaggacgtg
ccgcaccagtaccacctgatggatacgccggagctgcgcgcttctctgctggcgtttctg
ttgcagcagacggaagtcagcttcgatactgaaaccaccggcctggatattatgacggcg
cggctggtggggctaagtttctgctggctgcccggcgaggcctactacgtgcccgttccc
accgacgaccacgccgccactcaggcgctggtggatgagttccagccgtttttcgaggcc
gcgcacatcctcaaaatcggccagaacatcaagtacgacctcaccatcctcaagcattac
aacgtcgccatcaacgggccgctgtttgacaccatgctggcccactacctgctggagccc
gacatgcgccacggcatggacgtgctggccgaaacctacctgcactacacgcccgtgccc
atcacggcgctcatcggccccaaaggcaagaaccagaaaaccatggccgacctgcccccg
gccgaggtgtcagactacgcctgcgaggatgccgacgtgacgctgcagctcaagcacgtg
tttgagctgctgctcaaggaagtgggcctgctggatttgctcaacgaggtggaaaacccg
ctggtgccggtgctggccgacatcgagtacgagggcgtgaaaatcgactcctcggccatg
ggcgaatactcggccgagctgcaaggctacatcgtggacctggagaagcagattttctcg
gaagccggccaggagttcaacatcggctcgccgaagcagctgggcgaggtgctgttcgat
aaaatggacattggcaagggcaaaatcaagaagaccaagaccggccagtacgccaccggc
gaggaaatcctgagtcagctggcggccgaaaaccccattgccgccctcattctggagtac
cgccagctcagcaagctgcgcagcacctacgtggaggccctgccccagctagtgaatgtg
gccgacggccgcgtgcataccagcttcaaccaggccgtgacggccaccggccgcctcagc
agcaccaatcccaacctgcagaacattcccatccgcaccgaaaagggccgggaaatccgc
aaggccttcgtgccccgcgacgccggccacgtgttgcttgccgccgactactcgcaggtg
gagctgcgcatcatggccgacttctcgggtgataaaacgatgattgaagcctttcgccag
ggcctcgacattcacaccagcacggccagcaaggtattcaaagtgccgctcagtgaggtc
gacagcgagatgcgccgcaaagccaaaaccgtcaattttggcatcatctacggcatttcg
gctttcgggctggcccagcgcatcggcatctcgcgcaaggaagccaccgacatcatcgac
acctacttcgaggagttttcgtcggtgaagcagttcatggacaacagcatcaacaaggcc
cgggagctggaatacgccaccaccctgctgggccgccgccgctacctgcgcgacattaac
tcgcgcaacgccaccctgcgcggctacaccgagcgcaacgccatcaacgcccccatccag
ggcaccgcggccgacatcatcaagaaggccatgatcaacatccacgagtggctgcgccag
gaaaagcttggcaccaaaatgattctgcaggtgcacgatgaactggtattcgacgcggtg
caggaggaagtagcctacatcacgcccaaaataaaggagctgatggccaccgccctgctc
ctgccccacggcgtgccgctggaagtggaagtgggcaccggccgcaactggctgcaggcg
cactaa

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