Hymenobacter canadensis: O3303_16935
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Entry
O3303_16935 CDS
T09156
Name
(GenBank) T9SS type A sorting domain-containing protein
Organism
hcw
Hymenobacter canadensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Por_Secre_tail
Bact_surface_Ig-like
WxLIP_HBD
Motif
Other DBs
NCBI-ProteinID:
WBA41488
UniProt:
A0ABY7LM38
LinkDB
All DBs
Position
complement(3959646..3965774)
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AA seq
2042 aa
AA seq
DB search
MLTSLLSAAASGNHPAPGLQPGRWQRRLPMLVLLGLLGASAAQAQVVRTLPGDYTTLAAA
ITDLNTNGVPTGGVTINIAAGYTETAANLTLTASGTAANPVVFQKAGTGANPLLTAGTGT
STTTDGLIRLSGADYVTFDGLDVAESAANTTTTTQMEFGYGLFRASATDGCQNNIIRNCV
VTLNKTNAATIGIAGLASGTGSATAVPATNPAGANSNNLVYGNVVSNALKGIDFAAGSAT
TPLANFDQNNQVGLTPAGAAAGNTVGNFGGTASGWGIGGNYQNGYKVANNVVNSTLNYTS
ATASAPVAASTVTSTLRGIYGNAGAAASLDFLNNTVTLASGATTSQLSGIENGIGATGTT
NTVNITGNTVTGCTYATATTGIFYGLYNSATAGTVNISGNTVSNNTVPGSGAHYLISGSS
PTTLNILNNQLSGNTKGGSTASTSGTMFCISAGTAAVTASGNTISNNRIVSSGTSSSTLN
GYYNFSSPPSETVTNNTITNLTVEGSTSSSTSAINGILTNPASTTTKLVSQNVIGNLSLT
VGGTVYGIQSIAGNAVSISRNKIYGLSAAATAGTVYGLFLSTGTAITASNNLIGDLTAPT
SSGVNAVCGVFINSGTNVNLYYNTLYLAAVSSSATFGTSGIYAASLVPVVDLRNNLVVNN
STSGSTGGATVALRYLAAPGSSLAGTTNNNIYYAGTPGAANLIYAEGTTTLANAQQTLAA
YRTYVAAREQNSLTENPTFVSTTGTAAGFLHLSPSVPTQAESAAAAISGLTLDYDGETRG
TLPDIGADEGTFAPLDMSVPIITLTPLSNTTSTANRTLSVTIVDASGIATGANAPRLFFR
KGSSGTYQSVAASSVSGDVYTFTFDYALVGGVTGFDAIQYYVVAQDASPNANVSSSPAGG
TFTTPPASVYQFLIQGQLSGTYYVGTGTSPDPTRTYATLTAATQAYSNNLLAGPVTFLLL
DASYGPAETFPILLANNATASATNTLTIKPTTGLTTTLTGSNATALIALIGADYVTLDGN
SGGTISGTDPRPSRNWTLSNTSTATSSNGIVLTVPNSGTDNASNNTFRNLAVSGSGGATA
QAGILMLSATTNTVGNANNVVQNNAVSGATFGIYSVGPSATVKNTGTIITQNDMTVTGTG
AIGRYGITGLFEDGIQVTQNTVDGINSAATADVWGINLGFTGLTNNVYTGNEVTNATIDR
NYVGSVRQTNTYSAAGIALAAATSGTSVISNNMVAGVSSNGTAGDFGAGIFLGGGTGSIT
RVAFNSVSMSGTQTGGAQPGFALAVGGATPTVDIRNNVLANTQTTGTGKNVALGLAYSSS
TGAYAGLTSSNNDFFVGSGAAFLVGQTGGLVTAGIARTTLADLNTETGQDNPATSKTADP
QFASATDLHSTSPALNNAGVPVAGITVDFDGQSRSANTPDIGADEFALLDLATAALTGPT
AGAGCYSAAEAVSVTIRNNAATALDFATTPATITATVTGGTTPQTLTATVNTGTLAPGAS
LAVPVGTADLSAAGTYSLTATVAVAGDENTANNTLATPLSIVSTPRTVAFTYPAGTICAS
STAPVAATLGGGAATGGTFSAPTGLILDATTGAITPATSTPGTYTVTYTVTASGACPAVS
ATQSVTITPAASAAFSYSTATFCQSGTNPVATVTGTSGGTFSAPTGLSLDATTGTISLTA
STPGTYTVTYTAGTACPASATFSVTITAPATAGFSYAATSFCASQATAAAATLATGATAG
TFSSTTGLTINATTGAITPSTSTPGTYTVTNTVAASGGCAAATSTFSVTITAAPVATFSY
ANAAYCVGATGTAAPTLASGATAGTFSAPAGLSLNATTGVITLGTSAAGTYIVTNTVAAS
GACAATTATFSVTINARPAQPTVAPVYNGATTTLTSSSATGNQWYLNGTLIAGATNPTYV
VNTTAQFGQYTVVVTNAATGCASLPSAPLLVNSSVKPLAGSALSVYPNPTPDGNVSVELR
GYTKATELRVYNAVGQQVLERTLSGQPGVQTATLDLRQLPAGVYILRARTEGGLDMRRIT
KQ
NT seq
6129 nt
NT seq
+upstream
nt +downstream
nt
atgcttacatctttactgtcagcagctgccagcgggaatcatcccgcgccggggctgcaa
cctggccgctggcagcggcgcctgccgatgctggttctgctggggttgctgggggcttcg
gctgcccaggcgcaggtggtgcgcaccttgccgggcgactacaccacgctggcggcggcc
atcaccgacctcaataccaacggcgtcccgacgggcggggtcaccatcaacatagcggcc
ggctacaccgaaacggccgccaacctcacgctgacggcgagcggcacggctgccaacccg
gtagtgttccagaaagccggaaccggggccaatccgctgctcacggccggtaccggcacc
agcaccaccaccgacggcctcatccggctttcgggggccgactacgtgacgtttgacggc
ctcgacgttgcggaaagcgccgccaacaccaccacgaccacgcagatggagtttggctac
ggcctgttccgggcctcggccacggatggctgccagaacaacatcatccgcaactgcgtg
gtgacgctcaacaagaccaatgccgccaccatcggcattgccgggctggcttcgggcacg
ggcagcgccacggcggtgccggccaccaacccggccggcgccaactccaacaacctggtg
tacggtaatgtggtgagcaatgcgctgaagggcattgacttcgcggcaggcagtgccact
acgccgctggccaacttcgaccagaacaaccaggtgggcctgacgcccgccggcgcggcg
gccggcaataccgtcggcaacttcggcggcacggcttcgggctggggcatcggcggcaac
taccagaatggctacaaagtggccaacaacgtggtcaacagcacgctcaactacacctcg
gccacggcctcggcgccggtggcggcttccaccgtcaccagcaccctgcgcggcatctac
ggcaatgccggggcggccgccagcctcgacttcctcaacaacaccgtgaccctggccagc
ggcgccaccacgtcgcagctgtcgggcatcgagaacggcatcggagcgacgggcacgacc
aacaccgtgaacatcacgggcaataccgtgacgggctgcacctatgccaccgccacgacc
ggtattttctacggcctctacaattcagccacggcgggcacggtcaatatctcgggcaat
accgtcagcaacaacacggtgccaggctcgggagcgcactacctgatatcgggtagcagc
cccacgacgctcaacatcctcaacaaccagctcagcggcaataccaagggcggctcgacg
gccagcactagcggcaccatgttctgcatcagtgcaggcacggcggccgtcacggcctcg
ggcaacacgatcagcaacaaccgtatcgtgtcgagcggcacgagcagctctaccctgaac
gggtactacaacttcagctcgccgccttcggaaacggtgaccaacaacaccatcaccaac
ctcacggtggagggcagcacgtcctcgtcgacttcggccatcaacggcatcctaaccaac
ccggccagcaccaccaccaagctcgtcagccagaacgtcatcggcaacctgagcctgacg
gtgggcggcacggtgtacggcatccagtcgattgccggtaacgcggtaagcatttcgcgc
aacaagatttacggcctctccgctgccgccacggccggcacggtgtacggcctgtttctg
agcaccggcacagccattacggccagcaacaacctcatcggcgacctgacggccccgact
tccagcggcgttaatgccgtgtgcggggtgttcatcaacagcggcactaacgtcaacctg
tactacaacacgctgtatctggcggcggtatcgtcgtcggctactttcggcacgtcgggc
atctacgcggcgtcgctggtgccggtagttgacctgcgcaacaacttggtggtgaacaac
tccacatcgggcagcacgggcggcgctacggtggcactgcgctacttagccgcgccgggc
agcagcctggccggcaccaccaacaacaacatctactacgccggcacgccaggcgcggcc
aacttgatttacgccgaaggcaccaccacgctggccaatgcccaacagacgctggccgcc
taccgcacctatgtggccgcgcgcgagcagaactcgctgacggaaaacccgacgtttgtg
agcaccaccgggactgccgcgggctttctgcatctgagcccttccgtgccgacgcaggcg
gagagcgccgccgccgccatcagcggcctgaccctggactacgacggcgaaacccgtggt
acgctacccgatatcggggccgacgagggcacttttgcgccgcttgacatgagcgtgccg
atcatcaccctaactcccctcagcaacaccaccagcaccgccaaccgcaccctgtccgtc
acgattgtggatgccagcggcattgccaccggcgccaacgccccgcgcctgttcttccgc
aagggcagcagcggcacctaccagagcgtggcggccagcagcgtgagcggcgacgtgtac
acgttcaccttcgattacgccctggtgggcggcgttacgggcttcgatgccattcagtac
tatgtggtggcgcaggatgccagccccaacgccaacgtgagcagcagccccgcgggcggc
acgttcaccacgccgccggccagcgtgtatcagttcctgattcagggccagctgagcggc
acgtactatgtgggcacgggcacctcgccggaccccacccgcacttatgccaccctgacg
gcggccacgcaggcttacagcaacaacctgctggccggccccgtgaccttcctgctgctg
gatgccagctacggaccggctgagacgttcccgattctactggccaacaacgccacggct
tccgccaccaatacgctcaccatcaagcccactaccggcctcacgaccaccctgaccggc
agcaacgccacggcgctgattgcgctgattggggccgactacgtgacgctcgacggcaac
agcggcggcaccatttccggcaccgacccgcgtcccagccgcaactggacgctgagcaac
accagcaccgccaccagcagcaacggcatcgtgctgacggtgcccaactccggcaccgac
aacgcctccaacaacacgttccgcaacctggcggtgagcggcagcggcggcgctacggcg
caggccggtattctgatgctctcggccaccaccaacaccgttggcaacgccaacaacgtg
gtgcagaacaatgccgtgtcgggggctacgtttggcatttactcggtagggccaagcgcc
accgtgaaaaatacgggcaccatcatcactcagaacgacatgactgtgacgggtaccggt
gccatcgggcgctacggtatcaccggcctgttcgaggacggtattcaggtgacgcagaac
acggtggatggcatcaactcggcggccaccgccgacgtgtggggcatcaacctgggcttc
accggcctgaccaataacgtgtacaccggcaacgaggtaaccaatgccaccattgaccgc
aactacgtgggcagcgtgcggcagaccaacacgtactcggccgccggcattgcgctggca
gcggctacgtcgggcacatcggttatcagcaacaacatggtggctggcgtttcgtcgaac
ggcacggccggcgacttcggggccggcatcttcctgggcggcggcaccggctcgattacc
cgggtagccttcaactcggtgagcatgagcggcacccagacgggcggcgcgcagcctggt
tttgcgctggccgttggcggcgccacacctaccgttgacatccgcaacaacgtgctggcc
aacacccagaccacgggcaccggcaaaaacgtggccctgggcctggcctacagcagcagc
accggcgcctacgctggcctgacgtcttccaacaacgacttcttcgtgggctccggcgct
gcctttttagtgggccagacgggtggcctggtgacggcaggtatagcccgtaccaccctg
gccgacctcaacaccgaaactggccaggacaatccggcaacctcgaaaaccgccgatccg
cagtttgcctcggccacggatctgcacagcaccagccctgccctcaacaatgccggcgta
cccgtagcgggtatcacggttgacttcgacggccagagccgctcggctaacacgcccgat
atcggggccgacgagtttgcgctgctcgacctggcaacggccgctctcaccggccctacg
gccggcgccggctgctactccgccgccgaggccgtgtctgtcacgatccgcaacaacgct
gctaccgcgctggacttcgccactacgccggcaaccatcacggctaccgtaacgggtggc
accacgccccagaccctgaccgccaccgtgaacaccggcacgctggcccccggagcctca
ctggccgtgcccgtcggcaccgccgacctgtcggcggccggtacgtactcgcttacagcc
acggtggccgtagccggcgatgaaaacaccgccaataacacgttggccacgccgttgagc
atcgtgagcacgccgcgcacggtagccttcacgtatccggccgggactatctgcgccagc
tccactgctccggtggcggccactctcggcggcggcgcggctacgggcggcacgttcagc
gcccctaccggcctgatcctcgatgccacgacgggcgccatcacgcccgccaccagcacg
cccggcacctacaccgtcacgtacaccgtaactgcttcgggcgcctgcccggcagtatcg
gccacgcagtcggttacgattacgccggccgcttcggctgccttcagctacagcaccgcc
acgttctgccagagcggcaccaacccggtggctaccgtgacgggcaccagcggcggcacg
ttcagcgcccctaccggcctgagccttgatgccacgacgggcaccatcagcctgacggcc
tcgacgcccggcacgtacaccgtgacatacacggcaggcaccgcctgccccgcctccgcc
acgttcagcgtgaccatcacggccccggccacggccggcttcagctatgctgccaccagc
ttctgcgcctcgcaggctaccgccgcagccgctacgttggccaccggcgccacggctggc
acgttcagctcgactacgggcctgaccattaacgccaccacaggcgccatcacgccttcg
accagtacgcccggcacttacaccgtgaccaatacggtagcggcatccggcggctgcgcg
gcggccacgtccacgttcagcgtaacgattacggccgccccagtagctacattcagctac
gccaacgccgcctactgcgtgggcgccaccggcacggctgcgcctaccctcgcctccggc
gccacggccggcacgttcagcgccccggccggcctgagcctgaacgccactaccggcgtc
attactctgggtacctcggcagccggcacctacatcgtgactaacacggtggcggcttcg
ggggcctgcgccgctaccacggctacgttcagcgtgaccatcaacgcccggccagcccag
ccgacggtggcaccggtttataacggagccaccaccacgctcaccagctccagcgctacg
ggcaaccagtggtacctcaacggcacgctgattgccggtgctaccaacccaacctacgtg
gtgaacaccacggcccagtttggccagtacacggtagtcgtgaccaacgctgccacgggc
tgcgcctcgctgccctcggccccgctgctcgtcaacagcagcgtgaagccgctggccggc
tcggccctaagcgtgtaccctaaccccactcctgacggcaacgtcagcgtggagctgcgc
ggctacaccaaggccacggaattgcgcgtttacaacgccgtaggccagcaggtgctggag
cgtacgctgtcgggccagcccggcgtgcagaccgccaccctggatttgcgccagctgccg
gctggcgtctacatcctgcgcgcccgcaccgagggcgggctcgatatgcgccgcatcacc
aagcagtaa
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