Hymenobacter canadensis: O3303_17055
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Entry
O3303_17055 CDS
T09156
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
hcw
Hymenobacter canadensis
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcw02000
]
O3303_17055
Transporters [BR:
hcw02000
]
Other transporters
Pores ion channels [TC:
1
]
O3303_17055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
CarboxypepD_reg
TTR_TEN1-4
Motif
Other DBs
NCBI-ProteinID:
WBA41511
LinkDB
All DBs
Position
3993213..3996326
Genome browser
AA seq
1037 aa
AA seq
DB search
MSHNWYKQYNSDVQPAALAGLRHPAGFRLLLLSILLVLLPLLSQAQTRAISGRVVDAQSN
GLPGVTVVVAGTTVGTSTGSDGRFELQAPATATTLNFSFVGYSAQQVNITDKTSVQITLR
EDAQALGDVVVVGYGTARKQDVTGAVAVIGEKDFNRGTFTSPDQLLQGRVSGVQVSNNSG
QPGGPSTIRIRGNSAVTGTGQPLYVVDGVPLDGRTARPGLVASADVGAGADSNPLNFLNP
DDIETFTVLKDASATAIYGSRAAYGVVLITTKKGNSGAPVLSVGASTGFSTLLRRPEFLN
ASQFREAIRYYGVPTSGAVGSAGNPDKGGDVNALDEILRTGYLQNYNVAMSGGGETGRYR
LSLGYLDQKGIVRKTGFKKYSANLSTNFQFLESKKLGVDINIATSQFQEKLANITTDAGF
RGSLIGQALQWNPTRPLRRSDGSLDVEEGSVVNPLAASEYFNDEARVNTILASIAPSYKF
TDWLQYRMLLSVNYNSGERRTSIDQRLITYPGLLDQGFAAISSNELITQQMVHTLNFNKA
IATDLNLNAVLGYEYTTFSNAGFGVSAYGNPDPAIRGFGGSLGTFGLDYTNYLQASAAGN
RRITSFIDPSSALQSYFGRAIFNFKDRYVLTGTLRRDESSKFGPDNKVGYFPSFAVAWDL
SQESFFPAEKLSQLKLRAGYGLTGNQEFPAGSAQGRFSFNDNGAQSPLNARNDALKWQAD
AQFNVGVDIGAFDNRLTFAADYFNKVTSDLLFPTVPGQPAPPVQTIQWRNLDGKIVNKGV
EMALTTALVRNEQVDVGFNVNATFIRNEVSDLVGAPIITGAINGQGLSGATSQRIQNGQP
INAFYLEQYLGINEQGNSNYVTVDGTPNSPRVLAFVGSPNPTTLLGLGANARYGKLSLVA
NMTGAFGHYIYNNTLNAFGNVGQIGGQKNIALSTFENPVKEATGNAGSASTRYLEKGDFL
KLSNLTVSYGFGNLGSFVKGARVYVTGQNLLVFTGYDGFDPEVNTVKREANQVPSSGIDY
LPYPSARTFTFGVNFNL
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgagccataactggtacaaacagtacaactcggatgtgcagccggccgctttggcgggg
ctgcggcatcctgcgggctttcggctgctgctactcagtattctgctggtgctgctgccg
ttgctgagccaggcccagacccgcgccatttcggggcgcgtggtagatgcgcaatccaac
gggttgccgggcgtgacagtggtggtggctggaactacggtaggcaccagcaccggctcc
gatggccgctttgagctgcaggcccccgctacggctaccacgctcaacttttcttttgtg
ggctactctgctcagcaggtcaacatcaccgacaaaacgtcggtgcagataacgctgcgt
gaggatgcccaggctctcggcgacgtggtggtagtcggctacggcacggcccgcaagcag
gacgtaaccggcgctgtggccgtaattggcgaaaaagacttcaaccggggtacgttcacc
tcgcccgaccaactgctgcagggccgcgtatcgggcgtgcaggtgagcaacaacagtggc
cagcccggcggcccgtctaccatccgcatccggggcaactcggccgtgacaggcaccggt
cagccgctgtacgtggtggatggcgtgccgcttgatggccgcaccgcccggcccggcctg
gtagcctcagccgacgttggagccggcgccgacagtaacccgctcaacttcctcaacccc
gatgacatcgaaaccttcactgttctgaaggatgcctcggccacggccatctacggttcg
cgcgctgcctacggcgtggtgcttatcaccaccaaaaaaggcaattcgggcgccccagta
ctcagtgtgggcgcatccaccggcttctcgacgctactacgccgccccgagtttctgaac
gccagccagtttcgcgaggctatccgctactacggtgttcccaccagtggcgccgttggc
agcgccggtaatcctgataaaggcggcgatgtaaatgccctcgacgaaattctgcgcacc
ggctacctgcagaattacaacgtggctatgagcggcggcggcgaaaccgggcgctaccgc
ctctcgctcggctacctcgaccagaaaggcattgtgcgcaaaactggcttcaaaaagtat
agcgccaacctctccaccaactttcagtttttggaaagcaaaaagctgggcgttgatata
aacatcgccaccagtcagttccaagaaaagctggccaatatcacaaccgacgctggcttc
cggggtagcctcatcgggcaggcgttgcagtggaaccccacgcggcctctgcgccggtcc
gatggctcccttgatgtggaggaaggttcggtggtgaacccactggccgcctcggagtac
ttcaacgacgaggcgcgggtaaacaccatattggccagcatcgcgccctcttataagttc
accgattggctccagtaccggatgctgctgagcgtgaattacaactccggggaacgacgc
acgtccatcgaccagcgcctcattacctatcccggcctactggaccagggctttgccgcc
atcagcagcaatgagctgatcacccagcaaatggtgcatacactcaactttaataaggca
atagctaccgacctgaacctgaatgcagtacttggctacgagtacacgacgttttctaat
gcggggttcggcgtcagcgcgtatggtaatcctgaccctgccataagaggatttggaggt
tcgctgggaactttcggcctcgactacaccaactatcttcaggcttcggccgctggtaac
cgccggatcacatcgttcattgacccctcgtcggcgctgcaatcttacttcgggcgggcc
atcttcaacttcaaggaccgctacgtgctgaccggcaccctgcgccgtgacgaaagcagc
aagttcggccccgacaacaaagtgggctacttcccgtcgtttgccgtcgcctgggacctg
agtcaggagtcgttctttccggccgagaagctcagccagttgaagctgcgggccggctac
ggcctgactggcaaccaggagttcccggccggctcggcgcagggccgcttttcgtttaat
gataacggggcccaatccccactcaacgccagaaacgacgccctgaaatggcaggccgat
gctcagtttaacgtcggtgttgatatcggagcatttgataaccgcctcacctttgcggct
gattatttcaacaaagtcacttccgacctgctctttcctaccgtgccaggccagcccgcg
ccgccggtgcaaacgattcagtggcgcaacttggatggcaaaatcgtgaataaaggggtg
gaaatggccttgaccactgccttggtacgcaacgagcaagtagatgtaggcttcaacgtc
aatgcgaccttcatccgcaacgaggtgtcggatttggtgggtgcgcccatcataactggg
gccatcaatgggcagggcctgtcgggggctacttcgcagcgaatccagaacgggcagccc
atcaacgccttttatctggagcagtacctgggtatcaatgagcagggaaactcgaattat
gtcacagttgacggtacacccaacagtccaagggtactggccttcgtgggcagccccaac
cctaccacgctgctgggcctgggtgccaatgcgcgctatggcaaactctcccttgtcgct
aacatgaccggggccttcggtcactacatctacaacaacacgctcaatgcgtttggtaac
gtgggccagataggcggtcagaagaatattgccctctctacgtttgaaaatccagtcaaa
gaagcgaccggcaacgccggatcggcctcgacgcgctacctggaaaaaggcgacttcctg
aaactctccaacctgacagtctcctacggctttggcaatctgggcagcttcgtgaagggt
gctcgcgtgtacgtaacggggcagaacctgcttgtattcactggctatgacggatttgac
ccggaagttaatacggtgaagcgcgaggctaatcaggtgccctcctccggtatcgactac
ctgccttaccccagcgcccgcacgtttacgttcggcgttaacttcaatctctaa
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