Hymenobacter canadensis: O3303_17250
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Entry
O3303_17250 CDS
T09156
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
hcw
Hymenobacter canadensis
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
hcw03029
]
O3303_17250 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hcw02000
]
O3303_17250 (bamA)
Mitochondrial biogenesis [BR:
hcw03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
O3303_17250 (bamA)
Transporters [BR:
hcw02000
]
Other transporters
Pores ion channels [TC:
1
]
O3303_17250 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POTRA
Omp85
POTRA_2
Motif
Other DBs
NCBI-ProteinID:
WBA41549
LinkDB
All DBs
Position
4040289..4042814
Genome browser
AA seq
841 aa
AA seq
DB search
MDFSLHTVGRVAAVVLTLGVGFPVAGMAQVAPAASGEEPKRYELGGITISGARYLDANTL
IGLTGLRVGDPISLPGEEIGKAIRKLWDQGILGDVSVSIARTEGNRIFLDFNLKERPRLS
KFEFVGISKSQADDLGKKIKLIRGKVVTDALLSNTRTQVRKFYTNKGFLDAKVNITQQPD
SSLSNSVVLKINVDKGGKIKVRDIAFEGNEAFKDSKLKGKLKKTKEKKFPKILNSGKFQQ
LEFEEDKKKLIEFYNAEGYRDAIVVSDTLIRTEDGLALRIKLDEGPKYYFRNISWAGNYL
YDDKTLASVLGIKEGSVYSKETLDKRLNYNPTGQDITSLYMNDGYLFFSIDPVETKVEGD
SIDIEMRITEGVQARIKDINIAGNTKTSDHVLRRELRTLPGDKFNRELLIRSQREIATLG
YFDPEKVGINPVPNPADGTVDINYTVVEKPSDQITLSGGWGGFAGFIGTVGLVFNNFSLR
KASEFRNWTPVPAGDGQRLALNVQANGTQYQAYSFSFTEPWLGGRKPNSLSFSLNKSIQR
VGQAFDANSEQSIKVNSASLSLGRRLRWPDDYFTLSNSLSVSQYKLKNYPFIQAFADGNG
TANNITLNTTLSRNSIDNPTYTRRGSSLALSVNLTPPYSVFSGSHPNVNEWVEFHKWMLD
ASWFTPIVGKLVLNTRAHFGFIGNYNSSRAIGPFERFKLGGSGLAAGGGANFLVGTEYIG
LRGYADPQDPNAIPTARQTDNGGVVYNKFVMEMRYPVSLNPAATVYILSFAEAGNSFNSY
TDYNPYKLYRSAGFGARIFMSAFGLLGFDYGRAFDLIPRTSGSQTAQDRNQFHFIIGQQI
R
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggatttttctttgcacacagtgggccgggttgcggccgtagtactgaccttgggcgtc
gggtttccggtagctggtatggcgcaggttgcaccggccgcttccggcgaggagccgaag
cgttacgagctgggtggtatcaccattagcggagcccgctatctggatgccaacacgttg
atcggcctcaccgggctacgcgtcggcgaccctatctcactaccaggcgaagaaataggt
aaagcgattcgcaaactctgggaccagggcattctgggcgacgtgagcgtgtccatcgcg
cgcactgaaggcaaccgtatttttctggatttcaacctgaaagagcgtccccggctgtcg
aaattcgagttcgtgggtatcagcaagagccaggccgacgacttgggcaagaaaatcaag
ctgatccggggcaaagtggtgacagacgcgttgctaagtaatacgcgtacccaggtccgg
aagttttacactaacaaaggcttcctcgacgccaaggttaatatcacgcagcaaccagat
tccagtttgtcgaacagcgtagtgctgaagatcaacgtggataaaggtggcaagataaag
gtgcgcgacattgcttttgaaggcaatgaggcgttcaaagacagcaagctgaaaggcaag
ctcaagaaaaccaaagagaagaagtttccgaaaatcctgaattccggcaaattccagcag
ctggagtttgaggaggataagaagaagctgattgagttctataacgccgaaggctaccgc
gacgccattgtggtgtcggataccctgatccggacggaggacggcctcgcgctgcgcatc
aagctggatgaaggcccgaagtattacttccgcaacatcagctgggccggcaactacctc
tacgacgacaaaacgctggcgtcggtgctgggcatcaaggagggcagcgtgtacagtaag
gaaacgctggataagcgcctcaactacaacccgacgggccaggatatcacgtcgctctac
atgaacgatggctacctgttcttctccatcgacccggtggaaaccaaagtggaaggcgac
tcgattgatatcgagatgcgcatcacggagggcgtgcaggcccgcatcaaggacatcaac
attgccggcaacactaaaacgtcggaccatgtgctgcgccgcgagctgcgcacgctgccc
ggcgacaagttcaaccgggagctgctgattcgctcgcagcgcgaaattgctacgctggga
tatttcgacccggaaaaagtaggcatcaacccagtgccgaacccggctgatggcaccgtg
gacatcaactacacggtagtggaaaagccgtcggaccagattacgctttcgggcggctgg
ggcggctttgccggcttcatcggaacggtgggcctggtgttcaacaacttctcgctgcgc
aaggccagtgagttccgcaactggacgccggtaccggccggcgacggtcagcgactggcc
ctgaacgtgcaagccaacggcacgcagtaccaggcatattcgttctccttcacggagccg
tggctgggtggccgcaaaccaaactcgctgtcgtttagcctcaacaagagtatccagcgg
gtaggtcaggccttcgacgccaactccgagcagtcgattaaggtgaacagtgcctcgctg
agcctgggccgccgcctgcgctggcccgatgactacttcacgctcagcaactcgctgtcg
gtgagccagtacaagctgaaaaattacccgttcatccaggccttcgccgacggcaacggt
acggccaataacatcaccctcaacaccacattgtcgcgcaatagcatcgacaaccccaca
tacacgcgtcggggctcatcgctggcgctgagcgtgaacctgacgccaccatattcggta
ttcagtggctcgcacccaaacgtgaacgagtgggtggaattccacaagtggatgctggac
gcctcgtggtttaccccgattgtaggcaagctggtgctgaatactcgcgcccacttcggc
ttcatcggcaactacaacagctcccgcgccattgggccatttgaacgctttaagcttggc
ggctccggcctagccgcgggtggtggtgccaacttcttggtaggtaccgagtacatcggt
ctgcgcggctacgctgacccacaggacccgaacgccattccaacagcccgtcagacggac
aatggcggcgtggtgtacaataagtttgtgatggaaatgcgttatccggtgtcgctgaac
cccgcggctacggtatacattctgagttttgcggaagccggcaactccttcaacagctac
accgactacaatccatataaattgtatcgttcggctggttttggtgcccgaatcttcatg
tcggcattcggtttgcttggcttcgactacggccgggcgttcgacctgattccgcgcacg
agcggttcgcagacagcccaggaccgcaaccaattccacttcatcatcggtcagcagatc
cgctaa
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