Hymenobacter canadensis: O3303_17465
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Entry
O3303_17465 CDS
T09156
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
hcw
Hymenobacter canadensis
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcw03019
]
O3303_17465
03009 Ribosome biogenesis [BR:
hcw03009
]
O3303_17465
Messenger RNA biogenesis [BR:
hcw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
O3303_17465
Ribosome biogenesis [BR:
hcw03009
]
Prokaryotic type
rRNA processing factors
O3303_17465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
DUF5397
Motif
Other DBs
NCBI-ProteinID:
WBA41591
LinkDB
All DBs
Position
4087974..4089581
Genome browser
AA seq
535 aa
AA seq
DB search
MSNELIINSTQEGERIALLQDKRLIEYHFDRNDTNYSVGDIFLGTVKKVMPGLNAAFIDI
GYEKDAFLHYGDLGEQFPSLSKWVRGVQSQKTPVGALKSFGLEKPLDKVGKIADTLKKSQ
QVLVQIVKEPISTKGPRLSTDISMAGRYLVLVPFSNTISVSKKIVSKTERERLKRLIASI
KPDNFGVIIRTVAEGREVAELDRDMQSMTSKWEQLFTALRSAKSNDKVLGELGRTSSMLR
DMLNESFDAITVDTTARYEEMRGYLEQIAPDKLGLLKHYTGKVKVFEHLGIEKQLKTLFG
KTVTVPGGGYLVIEHTEALHVIDVNSGNKSNQESDQEATAVMVNMLAAKEVARQLRLRDM
GGIIVVDFIDMKSAESRKKVEDAVYQVMKHDKARYTILPITKFGLLQITRQRVRPAENIV
TGEVCPTCGGTGKISASIQVTDEIDNSIEDLLVTQNQSGITLHVHPFLHAYYTKGLVSRQ
MKWYLKYYKWIKVTKDTSLGLTDYRIEDENGEEIELHSAAAAMARLQDHEVDITD
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaacgaattaatcattaattctactcaggaaggagaacggattgccctgctacag
gacaagcggctcatcgaatatcatttcgaccgcaacgacaccaattactcggtgggcgac
atcttcctgggcacggtcaagaaagttatgcccggtctgaacgccgcgttcattgatatc
gggtacgaaaaagatgcgtttctgcactacggcgacctgggcgagcaatttccctcgctc
agcaagtgggtgcggggcgtacagtcgcagaaaacccccgttggcgccctcaagtcgttt
ggcctcgaaaagccgctcgacaaagtgggcaagattgccgacaccctcaagaagagccag
caagtgctggttcagattgtaaaagagcccatttccaccaaggggccgcgcctgtccacc
gatatttcgatggcgggccgttacctggtgctggtgcctttttcgaacaccatcagcgtg
tcgaagaagattgtgagcaagacggagcgcgagcggctgaagcggctcattgcttccatc
aagcccgacaacttcggcgtcattatccgcacggtggccgagggccgcgaagtggccgag
ctggaccgcgacatgcagagcatgaccagcaagtgggaacagctcttcacggcgttgcgc
tctgctaagtccaacgacaaagtgttgggcgagctgggccgcaccagctccatgctgcgc
gacatgcttaacgagtcgtttgatgccattacggtggatacgacggcccgctacgaggaa
atgcgtggctatctggagcagattgcgcctgataagctgggcctgctgaagcattacacc
ggcaaggtgaaggtgtttgagcatctgggcattgaaaagcagctgaaaacgctgtttggc
aaaaccgtgacggtgcccggcggcggctacctggtaatcgagcacaccgaagccctgcac
gtcatcgacgtgaactccggcaacaagagcaaccaggaaagcgaccaggaagccacggct
gtgatggtgaacatgctggcagccaaggaagtagcccggcagctccggctgcgcgacatg
ggcggcattatcgtcgtcgatttcattgacatgaaatcggcggagagccgcaagaaggtg
gaggacgcagtgtatcaggtgatgaaacacgacaaagcgcgctacaccattctgcccatc
accaagttcgggctgctccagattacgcggcagcgcgtgcgtccggctgagaacatcgtg
accggggaagtgtgccctacctgcggcggaaccggcaaaatctcggcttccatccaggta
actgacgaaatcgacaacagcatcgaagacttgctggtgacgcagaatcagtcgggcatt
acgctgcacgtgcatccgttcctgcatgcctactacaccaaaggcctcgtaagccggcag
atgaagtggtatctgaaatactacaagtggatcaaagtcaccaaggacaccagcctgggg
ctgaccgattaccgcatcgaagacgaaaacggtgaggaaattgagctgcactcggcggcg
gcggccatggcccgcctccaggaccacgaagtagatattaccgattaa
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