Hymenobacter canadensis: O3303_17955
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Entry
O3303_17955 CDS
T09156
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hcw
Hymenobacter canadensis
Pathway
hcw00550
Peptidoglycan biosynthesis
hcw01100
Metabolic pathways
hcw01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hcw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
O3303_17955 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
O3303_17955 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hcw01011
]
O3303_17955 (mrdA)
Enzymes [BR:
hcw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
O3303_17955 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
hcw01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
O3303_17955 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WBA41682
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All DBs
Position
4213087..4214925
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AA seq
612 aa
AA seq
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MQYLEGRRFVVLAIFLAVALTFGGRLFYIQVLDGSYKLAADRNTLQRIVQVPYRGLIYDR
KGQLLVQNMPVYDLMVVPREVKQLDTARFAQLLQLPLEEVRLGLQTARAYSRVKASPLVQ
NLSTPELAAIQDNLIDFPGFSIKARMARSYRTENMAHALGYVGAITPAFLEKEKYAKYLP
GDFLGISGLESFYEPQMMGRRGVQYRMVNVRGIEKGSFRDGEYDTLSVAGQDLHTSIDIE
LQKYGEMLMQNKRGSIVALDPKTGEILAMVSAPGFEPSVLTGKGMGNRYMELLQDTAKPL
FNRPLMATYPPGSVFKLVNELVALQMGVVTPQTPFDCNWKLVRCTHRHEYPHNVSIAIKN
SCNPYFYQVMRSAVLRGRSTNRFEDARLGYSEWRRQVMTFGLGDKLGVDISQEKKGLIPT
SDFYDKAYGFHRWNFRTIYSLAIGQGEMGVTGLQMANMLAIIANRGYFYTPHFVKGIGTG
GPLPQYRQRHVTAVDPQYFETIVPGMQQVVDGRGGTGNNASLLDVGISVAGKTGTVQNRH
GADHATFAAFAPAEDPKIAIAVFIENAGFGGSSAAPMAALMMEKYLRGDVAPWRKRWETW
LQRPAESFIRKR
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
ttgcaatacctcgaagggcgccggtttgtggtgctggctatttttctggccgtagccctc
acatttggaggccggcttttttacattcaggtactcgacggcagctacaagctggccgcc
gaccgcaacacgctgcagcgcatcgtgcaggtaccttatcgtggtctgatctatgaccgc
aaagggcagctgctggtgcagaacatgcccgtctacgacctgatggtggtaccgcgcgaa
gtcaagcagcttgatacggcccgcttcgcgcagctgctgcagctgccgctggaagaggtg
cgcctgggtttgcagacggcccgcgcctactcccgcgtgaaggcctcgccgctggtgcaa
aacctgagcacgcccgagctggccgccattcaggacaacctcatcgactttccgggcttc
agcatcaaggcccgcatggcgcgctcctaccgcaccgaaaacatggcccacgccttgggc
tacgtgggcgccatcacgccggcgtttctggaaaaggaaaagtacgccaagtacttgccc
ggcgactttctgggcatttcggggctggagtcgttttatgagccgcagatgatggggcgg
cgcggcgtgcagtaccgcatggtgaacgtgcgcggcatcgagaaaggctcgttccgcgac
ggcgagtacgatacgctgtcggtggccgggcaggacctgcacaccagcattgacatcgag
ctgcagaaatacggcgagatgctgatgcagaataagcgcgggtccatcgtggccctcgac
cccaaaaccggcgaaattctggccatggtgtcggcgccggggtttgagccgtcggtgttg
acgggcaaggggatgggcaaccgctacatggagctgctgcaggacacggccaagccgctg
ttcaaccgcccgctgatggctacctacccgccgggctcggtgttcaagctggtgaacgag
ctggtggcgctgcaaatgggcgtcgtgacgccccagacgccgtttgattgcaactggaag
ctggtgcgctgtacccaccgccacgagtatccgcacaacgtcagcattgccatcaagaac
agctgcaacccctatttctaccaggtgatgcgctcggccgtgctgcgcgggcgctccacc
aaccgcttcgaggatgcccgcttgggctacagcgagtggcgccggcaggtgatgaccttc
gggctgggcgacaagctgggcgtagacatttcgcaggaaaagaaaggcctcatcccgact
tccgacttctacgacaaagcctacggctttcaccgctggaacttccgcactatctattcg
ctggccatcgggcagggcgaaatgggcgtgacgggcctgcagatggccaatatgctggcc
atcattgccaaccgcggctacttctacaccccgcactttgtgaaaggcattggcacgggc
ggcccgctgccgcagtaccggcagcggcacgtcacggccgttgatccgcagtactttgaa
accattgtgccggggatgcagcaggtggtagacgggcgcggcggcaccggcaacaatgcc
tccttgctggacgtgggcatttcggtggccggcaaaacgggtaccgtgcagaaccgccac
ggcgccgaccacgccaccttcgccgccttcgcgcccgccgaagaccccaagattgccatt
gccgtcttcatcgaaaacgccggcttcggcggctcctccgctgcgcccatggccgccctg
atgatggaaaaatacctgcgcggcgacgtcgctccgtggcgcaagcgctgggaaacctgg
ctacagcgccccgccgaaagctttattcgaaaacgctaa
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