Hymenobacter canadensis: O3303_18290
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Entry
O3303_18290 CDS
T09156
Name
(GenBank) T9SS type A sorting domain-containing protein
Organism
hcw
Hymenobacter canadensis
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Paralog
GFIT
Motif
Pfam:
Por_Secre_tail
BiPBP_C
Bact_surface_Ig-like
PKD
DUF8696
CopC
Motif
Other DBs
NCBI-ProteinID:
WBA41747
UniProt:
A0ABY7LMS2
LinkDB
All DBs
Position
complement(4286538..4289744)
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AA seq
1068 aa
AA seq
DB search
MLALVLLLTPSLTWAQVQTPTTLTPISLGTAAYTQDFNTLAITGTSNSVPTGFGFVETNA
GTGTGANSTYTATTITATTSPNAGDTYSFGFGASATTDRAFGSLQSGSLVPQFGFAFTNT
TGATITSLAIGYTGEVYRLGGNTTPRNASDRLDFQYSTDATSLTTGTFTDVNSLDFTGPV
NNLTTAAGYDGNDDANRTAITGTITGLTIPAGATFYLRFVDANAVGTDDGLAIDDFSITA
TTSAPACNAAFAYAATSFCASGTNPTTTVTGTTGGTFSSTTGLSLDAATGTINLATSTAG
TYAVTYTISASCSSTASVTITTPATAGFSYAAASFCASQTTAAAATLTTGATAGTFSSTT
GLTIDATTGAITPSTSTPGTYTVTNTVAATGGCAAVAATTTVTVTAPATAGFSYASTANY
CTANTAAIAPVLATGATAGTFSSTTGLTLDATTGAITPSTSTPGTYTVTNTVAANGGCDA
VISTTTVTISDVPTATLTASGATTFCQGSSVVLSAPTGTGLTYQFALDGTTISGATTATY
TATTAGSYTVTVTNAAGCTTTSAATTVTVNPATTATFSYASTTLCVSGSATTPTVTGTAG
GTFSSTTGLTIDATTGAITPSSSTPGTYTVTYSVGGACPSSATASVTITTAPVATFSYDA
TGFCASQTATAAPVFGAGASAGTFSSTTGLTIDAATGAITPSTSTPGTYVVTNSIAAAGG
CAAATATFSVTITAAPVATFSYAATSFCTSQTATAAATLATGATAGTFSSTTGLSIDATT
GAITPSTSTPGTYTVTNTVAASGACAVTTATFSVTITAAPVATFSYTNAAYCVGATGTAA
PALAAGATAGTFSSTTGLTIDATTGVIDLATSTAGTYTVTNTVAASGACAATTATFSVTI
NALPAQPTVAPVYNGATTTLTSSSTTGNQWYLNGTLIAGATDQTYVVNTTAQFGQYTVVV
TNAATGCTSLPSAPLLVNSSVKPLAGSALSVYPNPTVDGNVSVELRGYTKATELRVYNAV
GQQVLERTLPGQPGVQTATLDLRQLPAGVYILRARTEGGLDVRRITKQ
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgctggctctggtactgctacttacgccttcgctgacttgggcccaggtccaaacccca
acaaccctcacccctatcagcctgggcaccgccgcctacacccaggattttaacaccctg
gctatcactggtaccagcaacagcgttccaactggcttcgggtttgtagaaaccaatgcc
ggcaccggcaccggtgccaacagcacctacaccgccacgaccattacggctaccactagc
cccaacgcgggtgacacctacagctttggcttcggcgcctccgctactaccgaccgcgcc
ttcggcagccttcagagtggttcgctggttccgcagttcggctttgctttcaccaacacg
accggcgctaccattaccagcctggcaattggctacacgggcgaagtttaccgcctggga
ggcaacacaacgccccgcaacgcgtcggaccgtttggatttccagtacagcaccgacgcc
acttcgctcaccacgggcactttcacggacgtaaattcgctcgacttcaccggcccggtt
aataacctcaccacggccgcaggctacgatggcaacgacgacgccaaccggaccgccatt
acgggcaccatcacgggtctgaccattcccgcgggcgccacgttttaccttcgctttgtc
gacgcaaacgctgttggcaccgatgacggcttggccatcgacgacttttccattacggct
accaccagcgctccggcttgcaatgcagccttcgcttacgcagctacttccttctgcgcc
agcggtaccaaccccaccactacggtaacgggtaccacgggcggcacgttcagctcgacc
acggggctgagcctcgacgcggctaccggcaccattaacctggcgacctccacggccggc
acttatgccgtgacgtacacgatttctgctagttgcagcagcacagcatcggtgaccatc
accacgccagctacggctggcttcagctacgcggccgccagcttctgcgcttcgcagacc
acggccgctgccgcaacgctcacgacgggcgccacagctggcacgttcagctccaccaca
ggcctgaccattgacgctacgaccggcgccatcacaccttcgaccagcacgcccggcacc
tacaccgtgaccaacacagtagccgcaaccggcggctgcgccgccgtggcggctaccact
accgtcactgttacggctccggctacggccggcttcagctatgccagcacggctaactac
tgcacagctaacacggcggccattgcgcctgtcttagccacgggcgctacggccggtacg
ttctcctcgaccacaggcctgacgctggacgccacgaccggagccatcacgccttccacc
tcaacccccggcacctacaccgtgaccaacacggtagctgctaacggcggctgtgatgcc
gtcatcagcacgacgacggtaaccatcagcgacgtacccactgctacgctcaccgccagt
ggcgccactacgttctgccaaggcagctcggtggtgctttctgctcctaccggtacgggc
ctgacctaccagttcgcactcgacggcacgactatcagcggcgctaccacagccacctac
accgccacgacggcgggcagctacacggtgacagtaaccaacgcggcgggctgcactact
acttcggctgcaaccacggtcaccgtgaatccagccaccacggctacgttcagctacgcc
agcaccacgctctgcgtgagcggcagcgccaccacgcctaccgtaacgggtactgccggt
ggcacattcagctccaccacgggcctgaccattgacgccacaaccggcgccatcacgccg
tcctcgagcacgcccggcacctacaccgtgacttactcggtaggcggcgcctgcccgtct
tcagccacagccagcgtgaccattaccacggctcccgttgccacgttcagctacgacgct
actggcttctgcgcctcgcagacggccacggccgcgccggtattcggcgccggtgcttcg
gccggcacgttcagctccaccacgggcctgaccattgatgccgctaccggtgccatcacg
ccttcgaccagcacgcccggtacgtatgtcgtgaccaacagcattgccgccgccggtggc
tgtgccgccgccacggccacgttcagcgtgacgattacggccgcgccagtggctacgttc
agctacgctgccactagcttctgtacctcgcagacggccacggcagccgccacgctggcc
accggcgccacggctggcacgttcagctccactacgggcctgagcattgatgccaccacg
ggtgccattactccttcaaccagcacgcctggcacttataccgtgaccaatacggtagcc
gcttccggcgcctgcgctgtgactacggccacgttcagcgtgaccatcacggctgctccg
gtagccacgttcagctacaccaacgccgcctactgcgtgggcgccaccggcacggctgcc
ccagccctcgccgccggcgccacggccggcacgttcagctcgactacgggcctgaccatt
gacgccactaccggcgttatcgacctggccacgagcacggccggcacttataccgtgacc
aacacggtagccgcttcgggcgcctgcgctgctaccacggctacgttcagcgtgaccatc
aacgcccttccggcccagccgacggtggcgccggtttataacggggccaccaccacgctc
accagctccagcactacgggcaaccagtggtacctcaacggcacgctgattgccggtgct
accgaccagacgtacgtggtgaacaccacggcccagtttggccagtacacggtagtcgtg
accaacgctgctacgggctgcacttcgctgccctcggccccgctgctcgtcaacagcagc
gtgaagccgctggccggctcggcactgagcgtgtaccccaaccctactgttgacggcaac
gtcagcgtggagctgcgcggctacaccaaggccacggaattgcgcgtttacaacgccgtg
ggccagcaggtgctggagcgtacgctcccgggccagcctggcgtgcagaccgccacgctg
gatttgcgccagctgccggccggcgtctacatcctgcgcgcccgcaccgagggcggcctc
gatgtgcgccgcatcaccaagcagtaa
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