Hydrogenophaga crocea: G9Q37_02385
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Entry
G9Q37_02385 CDS
T08489
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hcz
Hydrogenophaga crocea
Pathway
hcz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G9Q37_02385 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcz03019
]
G9Q37_02385 (pcnB)
Enzymes [BR:
hcz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
G9Q37_02385 (pcnB)
Messenger RNA biogenesis [BR:
hcz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
G9Q37_02385 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QIM51062
UniProt:
A0A6G8ID32
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All DBs
Position
508019..509671
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AA seq
550 aa
AA seq
DB search
MIKKFIDKLLGKSRGPRAGARFGKREDVPASVHGINPKLVDPRALEVVHTLKQAGFEAYI
VGGAVRDLLLGLRPKDFDVATSATPEQVKGLFRRAFIIGRRFRIVHVVHGRGREHEVIEV
STFRAYLDNADAEQVAGNERTSKGELSGMKHAVDASGRVLRDNVWGPIEQDAARRDFSVN
AMYYDPETQTVVDFHHGIRDAQKKLLRMIGDVPTRYREDPVRIIRAVRFAAKLAPLGFKL
DAKTREPLIASVQLLQDVPQSRLFDEMLKLLQTGHALASVAQLKALGVDRGIYPLLDIVV
QRADDPFVKLALQDTDRRVGEGKPVAPSFLLACVLWADVRRGWERRLEARPGHKPVPAFA
ALQDAIDEAFDARIGDVSGRGKLGADMREIWLMQPRFDKRTGSGVFTLVEQPRFRAGFDF
LRLRAQVGECDEELAHWWETFSTASDERRQDMIDAQRNAGRGAPKARRVKRGDADHPASA
AAPVDDDPRWREPAGDEGEGPEADAEAAPLAEGEAAPAKKRRRRRRKPNGAPRAEGGADN
GPPGGGDAPA
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagaaattcatcgacaagctgctgggcaagtcccgcggcccccgcgcgggcgcg
cgcttcggcaaacgcgaagacgtgccggccagcgtgcacggcatcaaccccaaactggtg
gacccgcgcgcgctcgaggtggtgcacaccctcaagcaggccggcttcgaggcctacatc
gtgggcggcgccgtgcgcgacctgctgctcggcctgcgccccaaagacttcgacgtcgcc
accagcgccacgcccgagcaggtcaagggcctgttccggcgcgccttcatcatcggccgg
cgctttcgcatcgtgcacgtggtgcatggccgcgggcgcgagcacgaggtgatcgaggtt
tcgaccttccgcgcctacctcgacaacgccgacgccgagcaggtggccggcaacgagcgc
accagcaagggcgagctctcgggcatgaagcacgccgtggacgcgagcgggcgcgtgctg
cgcgacaacgtctggggcccgatcgagcaggacgcggcgcgccgcgacttctcggtcaac
gccatgtactacgaccccgagacgcagaccgtggtcgacttccaccacggcatccgcgac
gcgcagaagaagctgctgcgcatgatcggcgacgtgcccacgcgctaccgcgaagacccg
gtgcgcatcatccgcgccgtgcgcttcgcggccaagctcgcgccgctgggcttcaagctc
gatgccaagacgcgcgagccgctgatcgcctcggtgcagctgctgcaggacgtgccgcag
agccgcctgttcgacgagatgctcaagctgctgcagaccggccacgcgctggccagcgtg
gcccagctcaaggcgctgggcgtggaccgcggcatctacccgctgctcgacatcgtggtg
cagcgcgccgacgaccccttcgtgaagctcgcgctgcaggacaccgaccgccgcgtgggc
gagggcaagcccgtggcgccgagcttcctgctggcctgcgtgctctgggccgacgtgcgc
cgcggatgggagcgccgcctcgaagcgcgtcccggccacaagcccgtgccggcctttgcc
gcgctgcaggacgccatcgacgaggccttcgacgcgcgcatcggcgacgtctccggccgc
ggcaagctcggcgccgacatgcgcgagatctggctcatgcagccgcgcttcgacaagcgc
accggcagcggcgtgttcacgctcgtggagcagccgcgcttccgcgccggcttcgacttc
ctgcgcctgcgcgcgcaggtcggcgagtgcgacgaagaactcgcgcactggtgggaaacc
ttcagcaccgcgagcgacgagcgccgccaggacatgatcgacgcccagcgcaacgcggga
cgcggcgcgcccaaggcgcggcgcgtcaagcgcggtgacgccgaccatccggccagcgcg
gcggcgccggtcgacgacgacccgcgctggcgcgagcccgcgggcgacgagggcgaaggc
cccgaagccgatgccgaggccgcgccgctggccgaaggcgaagccgcgcccgccaagaag
cgccgccgccgccgccgcaagcccaacggcgccccgcgcgccgagggcggcgccgacaac
ggcccgcccggtggcggcgatgcgcccgcctga
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