Hydrogenophaga crocea: G9Q37_02530
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Entry
G9Q37_02530 CDS
T08489
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
hcz
Hydrogenophaga crocea
Pathway
hcz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hcz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G9Q37_02530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hcz03019
]
G9Q37_02530
Enzymes [BR:
hcz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G9Q37_02530
Messenger RNA biogenesis [BR:
hcz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G9Q37_02530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
QIM51089
UniProt:
A0A6G8ID86
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All DBs
Position
complement(535683..537407)
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AA seq
574 aa
AA seq
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MNFEELNLAPAIVQAVQEHGYNTPTPIQVEAIPAVLAGRDLLAGAQTGTGKTAAFTLPML
QRLSQGPRGANRFGGIGIRALVLTPTRELAAQVEESVRVYGKHVDLSSAVVFGGVGMNPQ
INAMKRGVDILVATPGRLLDLQQQGFLDLSTVQMLVLDEADRMLDMGFIHDVKKVLALLP
QSKQSLLFSATFSDEIRELANGLLKDPQHIQVTPPNTTVQRITQVIHPVGRGKKKALLVH
IIQLHNWSQVLVFTRTKFGANNVAEYLNKHGVTAMALHGNKSQGARTQALAGFKSGEIRA
LVATDIAARGIDIDELPHVVNYDIPNICEDYVHRIGRTGRAGREGQAVNLVSLDEEGFMM
EIERFTKQQIPVEMFAEFMPEPGEKAEPIAMGRQTLWGGAGKPPSREVMAAAAKAARQEM
VQRIREKKSNEGPGRGQGEGNGQGQGQNRNGQNRHKAKGPRPQGQGQGNGQNFNAGGGQQ
RQRPPRGDRPPRFEGEEGHERQPGPNAHLGSLRIRDPKPRQANPNGQPDPLRTGIDAMRT
SNRHKKKGKGGGGGPRGDGPVDPLRTSFGRIGNN
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcgaagaactgaacctggccccggccatcgtgcaagccgtgcaggagcacggc
tacaacaccccgaccccgatccaggtcgaggccatccccgccgtgctcgcgggccgcgac
ctgctcgccggcgcgcagaccggcaccggcaagaccgccgccttcacgctgcccatgctg
cagcgcctctcgcagggtccgcgcggcgccaaccgcttcggcggcatcggcatccgggcc
ctggtgctcacgcccacgcgcgaactcgcggcccaggtcgaagagtcggtgcgcgtctac
ggcaagcacgtcgacctgagctccgccgtggtcttcggcggcgtcggcatgaacccccag
atcaacgccatgaagcgcggcgtcgacatcctggtcgccacgcccggccgcctgctcgac
ctgcagcaacagggcttcctcgacctgtccaccgtgcagatgctggtgctcgacgaagcc
gaccgcatgctcgacatgggcttcatccacgacgtgaagaaggtgctggccctgctgccc
cagagcaagcagagcctgctgttctcggccaccttcagcgacgagatccgcgaactcgcc
aacggcctgctcaaggacccgcagcacatccaggtcacgccgcccaacaccacggtgcag
cgcatcacccaggtcatccaccccgtgggccgcggcaagaagaaggcgctgctggtgcac
atcatccagctgcacaactggagccaggtgctggtgttcacgcgcaccaagttcggcgcc
aacaacgtggccgagtacctcaacaagcacggcgtcacggccatggcgctgcacggcaac
aagagccagggtgcgcgcacccaggcgctggccggcttcaagagcggcgagatccgcgcc
ctcgtggccaccgacatcgccgcccgcggcatcgacatcgacgagttgccgcacgtcgtc
aactacgacatccccaacatctgcgaagactacgtgcaccgcatcggccgcaccggccgc
gcgggccgcgaaggccaggcggtcaacctcgtgagcctcgacgaagagggcttcatgatg
gagatcgagcgcttcaccaagcagcagatcccggtcgagatgttcgccgagttcatgccc
gaaccgggcgagaaggccgagcccatcgccatgggccgccagaccctctggggcggcgcc
ggcaagccgcccagccgcgaggtgatggccgcggccgccaaggccgcgcgccaggagatg
gtgcagcgcatccgcgagaaaaagtccaacgaaggcccgggccgcggccagggcgaaggc
aacggccagggtcagggccagaaccgcaacggccagaaccgccacaaggccaagggcccg
cgcccgcagggccagggccagggcaatggccagaacttcaacgccggcggcggccagcag
cgccagcgcccgccgcgcggcgatcgcccgccgcgcttcgagggcgaagagggccacgag
cgccagccgggcccgaacgcccacctgggcagcctgcgcatccgcgaccccaagccgcgc
caggccaaccccaacggccagcccgatccgctgcgcaccggcatcgacgccatgcgcacg
agcaaccgccacaagaaaaagggcaagggcggcggcggcggcccgcgtggcgatggtccg
gtggatccgctgcgcacctccttcggccgcatcggaaacaactga
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