KEGG   Hydrogenophaga crocea: G9Q37_07905
Entry
G9Q37_07905       CDS       T08489                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
hcz  Hydrogenophaga crocea
Pathway
hcz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hcz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    G9Q37_07905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hcz03021]
    G9Q37_07905
   03019 Messenger RNA biogenesis [BR:hcz03019]
    G9Q37_07905
Transcription machinery [BR:hcz03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     G9Q37_07905
Messenger RNA biogenesis [BR:hcz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     G9Q37_07905
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB NACHT AAA_25 S1CSD-TOTE-2 Spore_III_AA AAA_19 AAA ResIII
Other DBs
NCBI-ProteinID: QIM52069
UniProt: A0A6G8IG30
LinkDB
Position
1662218..1663483
AA seq 421 aa
MHLNELKALHVSEVVKQAEALEIENTGRMRKQELMFAIIKKRAKTGEQIYADGVLEVLPD
GFGFLRAPDTSYTASTDDIYISPSQIRRFNLHTGDMIEGEVRIPKDGERYFALNKLDKIN
GLPPEDNKHKIMFENLTPLFPKEQMRLERDNLKGDENITGRIIDIIAPIGRGQRALIVAP
PKSGKTVMMQHICHAITANHPDVELMVLLVDERPEEVTEMQRTVRGEVIASTFDEPAARH
VHVAEMVIERAKRLVELKKDVVIMLDSITRLARAYNNVLPSSGKVLTGGVDANALQRPKR
FFGAARKVEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNCEIHLDRRLYEKRVFPSIQ
LNRSGTRREELLLQPEILQKTRILRQFMYNMDEIESMEMVLKSMKATKNNSEFFDMMRRG
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcacctcaacgaactcaaggccctgcacgtatccgaagtggtcaagcaggccgaagcg
ctcgagatcgagaacaccggccgcatgcgcaagcaggagctgatgttcgccatcatcaag
aagcgcgcgaagaccggcgaacagatctacgccgatggcgtgctcgaagtgctgcccgat
ggcttcgggttcctgcgcgcgcccgacaccagctacacggcgagcaccgacgacatctac
atctcgcccagccagatccgccgcttcaacctgcacaccggcgacatgatcgagggcgag
gtgcgcattcccaaggacggcgagcgctacttcgcactcaacaagctcgacaagatcaac
ggcctgccccccgaggacaacaagcacaagatcatgttcgagaacctgacgccgctgttc
cccaaggaacagatgcgcctcgaacgcgacaacctaaagggcgatgagaacatcaccggc
cgcatcatcgacatcattgcgcccatcggccgcggccagcgcgcgctgatcgtggccccg
cccaagagcggcaagacggtgatgatgcagcacatctgccacgccatcacggccaaccac
cccgacgtggagctgatggtgctgctggtggacgagcgccccgaggaagtgaccgagatg
cagcgcaccgtgcgcggcgaggtcatcgcctccaccttcgacgagcccgccgcgcgccac
gtgcatgtggccgagatggtgatcgagcgcgccaagcgcctggtcgagctcaagaaggac
gtggtgatcatgctcgactccatcacccgcctggcccgcgcctacaacaacgtgctgccc
tcatcgggcaaggtgctcaccggcggcgtcgacgccaacgcgctgcagcgccccaagcgc
ttcttcggcgccgcgcgcaaggttgaagaaggcggttcgctcaccatcatcgccaccgcg
ctggtcgacacgggctcgcgcatggacgaggtgatcttcgaagagttcaagggcaccggc
aactgcgagatccacctcgaccgccgcctctacgaaaaacgcgtcttcccctccatccag
ctcaaccgcagcggcacgcgccgtgaagagctgctgctgcagcccgagatcctgcagaag
acccggatcctgcgccagttcatgtacaacatggacgagatcgagtccatggagatggtg
ctcaagagcatgaaggccacgaagaacaactcggagttcttcgacatgatgaggcgcggc
ggttga

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