Hydrogenophaga crocea: G9Q37_12570
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Entry
G9Q37_12570 CDS
T08489
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
hcz
Hydrogenophaga crocea
Brite
KEGG Orthology (KO) [BR:
hcz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hcz03016
]
G9Q37_12570
Enzymes [BR:
hcz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
G9Q37_12570
Transfer RNA biogenesis [BR:
hcz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
G9Q37_12570
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QIM52917
UniProt:
A0A6G8II82
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All DBs
Position
2662516..2664582
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AA seq
688 aa
AA seq
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MHILFDEAGKFLTGRLMSEAESSMQVELDSGKRVKVKAANALLRFDKPAPAELMAEAAQI
AQTLELELAYEFAPDDEFGFADLAREYFSAQASPAQQVAALLTLQGAPHYFRRAGKGRFK
KAPPEIVAQALAAIEKKQQLQAQIEAWTEELVQGRCPPPVLDQLYRILFKPDKNGPEYKA
VVEAAKRSLTAPLALLQQAGAIRSAYQFHWQRFLFEHFPKGTGFAAMQAPAITDDLPLAP
VQAVSIDDSATTEIDDALSLQGLGTGTVTLGIHIAAPGLAITPDSVLDQIARHRLSTVYM
PGHKITMLPDAVVQAYTLQEGRDCPAVSLYVVFDEATLEVRDSRTALERVPIVRNLRHDK
LDAVITEAWLGGAPSADAPADLAALQPMLAFLHRFAQHHKAQREVVRGKPETFTRPDYTF
KLDGVQGDEPDGSERVLIGTRSRGAPLDLIVAEAMILANKTWGQWLADCGVPGIYRSQAS
LLPGIKVRMGTKALPHAGIGVKCYTWATSPLRRYVDLVNQWQIIACARHGKTAALAAPFK
PKDANLFAVISAFDAAYSAYNGFQGGMERYWTLQYLRQNAITELSATLIKDGLVRADTLP
LVLPVLGAEGLPRGARLRVRLGQADDITLEISGTVIERLDPPVDSAAALDTEAEAEDEEE
PLGAPLALAIDVNDAQPDNAAAAPDENG
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcctgttcgacgaggccggcaagttcctgaccggccgattgatgtccgaggcc
gagagttcgatgcaggtcgaactcgactcgggcaagcgcgtgaaagtgaaagcggccaac
gcgctgctgcgcttcgacaaacccgccccggccgagctcatggccgaggccgcacagatc
gcccagaccctggagctcgagctcgcctacgaattcgcgcccgacgacgaattcggcttc
gccgacctggcgcgcgagtacttcagcgcccaggccagccccgcccagcaggtggccgcg
ctgctcacgctgcagggcgcgccgcactatttccgtcgcgcgggcaagggccgcttcaag
aaggcgccgcccgagatcgtggcccaggccctggccgcgatcgagaagaagcagcagttg
caggcgcagatcgaggcctggaccgaagaactggtgcagggccgctgcccgccgccggtg
ctcgaccagctctaccgcatcctcttcaagcccgacaagaacggccccgagtacaaggcc
gtggtcgaggccgccaagcgcagcctgaccgcgccgctcgcgctcctgcagcaggctggc
gcgatccgcagcgcctaccagttccactggcagcgcttcctgttcgagcactttcccaag
ggcacaggcttcgcggccatgcaggcgcccgccatcaccgacgacctgccgctcgcgccg
gtgcaggccgtctccatcgacgactcggccaccaccgagatcgacgacgcgctctcgctg
cagggcctgggcacgggcacggtcacgctgggcatccacatcgcggcgccgggcctggcc
atcacgcccgacagcgtgctcgatcagatcgcgcgccaccgcctgtccaccgtctacatg
ccgggccacaagatcaccatgctgcccgacgccgtggtgcaggcctacacgctgcaggag
gggcgcgactgccccgcggtgtcgctctacgtggtgttcgacgaagccacgctcgaggtg
cgcgacagccgcaccgcgctcgaacgcgtgcccatcgtgcgcaacctgcgccacgacaag
ctggacgccgtcatcaccgaggcctggctgggcggcgcaccgagtgccgacgcacccgcc
gatctcgccgcgctgcagcccatgctggccttcctgcaccgtttcgcgcagcaccacaag
gcgcagcgcgaggtggtgcgcggcaagcccgaaaccttcacgcggcccgactacaccttc
aagctcgacggcgtgcagggcgacgaacccgatggcagcgagcgcgtgctcatcggcacg
cgctcgcgcggcgcccccctcgacctgatcgtggccgaggccatgatcctggccaacaag
acctggggccagtggctcgccgactgcggcgtgcccggcatctaccgcagccaggccagc
ctgctgcctggcatcaaggtgcgcatgggcaccaaggcgctgccgcacgcgggcatcggg
gtcaagtgctacacctgggccacctcgccgctgcgccgctacgtggacctggtcaaccag
tggcagatcattgcctgcgcgcgccacggcaagaccgccgcgctggccgcgcccttcaag
cccaaggacgccaacctgttcgcggtcatcagcgcctttgacgccgcctacagcgcctac
aacggcttccagggcggcatggagcgctactggacgctgcagtacctgcggcagaacgcc
atcaccgagctcagcgccaccctcatcaaggacggcctggtgcgcgccgacaccctgccc
ctggtgctgcccgtgctgggcgccgagggcctgccgcgaggcgcccgcctgcgcgtgcgc
ctgggccaggccgacgacatcaccctggagatctcgggcaccgtgatcgaacgcctggac
ccgccggtggacagcgccgccgcgctcgacaccgaggccgaggccgaggacgaggaggaa
ccgctcggcgccccgctggcgctggccatcgacgtgaacgacgcccagcccgacaacgcc
gctgcggcacccgacgagaacggataa
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