Natronorubrum daqingense: BB347_00290
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Entry
BB347_00290 CDS
T04679
Name
(GenBank) ATP-dependent DNA helicase Rep
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hda
Natronorubrum daqingense
Pathway
hda03420
Nucleotide excision repair
hda03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BB347_00290
03430 Mismatch repair
BB347_00290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hda03400
]
BB347_00290
Enzymes [BR:
hda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BB347_00290
DNA repair and recombination proteins [BR:
hda03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BB347_00290
MMR (mismatch excision repair)
Other MMR factors
BB347_00290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
UvrD_C_2
DEAD
AAA_11
AAA_22
Herpes_ori_bp
AAA_12
AvrPphF-ORF-2
AAA_25
Helicase_RecD
TrwB_AAD_bind
GDC-P
Motif
Other DBs
NCBI-ProteinID:
APX95162
UniProt:
A0A1N7A2P4
LinkDB
All DBs
Position
complement(64638..66512)
Genome browser
AA seq
624 aa
AA seq
DB search
MATTETKVTRLFGGPGSGKTTALLDHVEEILEQDDVTFRDILVVSYTRAAAQEVRERLAE
RLDESPRALQGNVCTMHAKAYELLDLSRNDVIGESDKEEFCEEYGIEYEDEYSGAGRRTA
RSTTIGNKIIATSQWLQRTSRDVADWYDVPFQWDEEEVRLPPEIDSNAQEGNKYTPTWPS
DDDRIDVPEAIRGWRSYKGEHGKIGFADMLERVKQRSLLPSVDYLVIDEFQDITTMQYDV
YEEWKPHMEQVLIAGDDDQVVYSWQGADPALLLDEEVDDDVILPNSYRLPSNVLNAVNKE
IRHIDKRQDKDLKPRKEGGAVEARRNASMLDVVRMVRRTLVEDDSTIMILFRARYQMFQF
IDEFITEGVPFTSLTDQRMWTDRLTQYVRAVEALEEGEDVTGLQARRLADMLQESAFGTN
ERDGLFDEIDERQEETGIEDLEELMIPADVIEEYAPFMPGPASASDMVRKVTNFQKKSIK
SYFGIGEYTGMATDRVRVGTIHSAKGREADHVIIGTDLTEKVVEQMVATVDDPEAIPGCE
EFTKTTSPVPVLTDNERRVFYVGMSRARERLVILENLVDGAPTLPIDVLLHNELREEPLE
EIIEAAQEPQEADANSEELEAEAP
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggctaccacggagacgaaggtgacccggttgttcggtggtccgggcagcgggaagacg
actgccctgctcgaccacgtcgaagaaatcctcgaacaggatgacgtgacgttccgggat
atcctcgtcgtctcgtacactcgtgcggctgcacaagaggttcgtgagcgattggctgag
cgactcgacgagagtccgcgtgccctgcaaggaaacgtctgtacgatgcacgcgaaggcc
tacgaactgctcgatctctctcgaaacgacgtcatcggcgagtccgacaaagaagagttc
tgtgaggagtacggcatcgagtacgaagacgagtacagtggtgccggtcgccgaaccgct
cgctcgacgacgatcggaaacaagatcatcgcgacgagccagtggctccagcggaccagc
cgcgacgtcgccgactggtacgatgtccccttccaatgggacgaagaggaggttcgactc
ccgcccgagatcgactcgaacgcccaggagggcaacaagtacacgccgacgtggccctcc
gacgacgaccgaatcgacgttcccgaagcgattcgcggctggcgctcctacaagggcgaa
cacggcaagatcggcttcgcggacatgctcgagcgcgtcaaacaacgctcgctcctcccg
agcgtcgactacctcgtgatcgacgagtttcaggacatcacgacgatgcaatacgacgtc
tacgaggaatggaaaccacacatggagcaggtcctcatcgccggcgacgacgatcaggtt
gtctactcctggcagggggccgatccggcactcttactcgacgaggaagtcgacgacgac
gttattctgccaaactcctaccggcttccatcgaacgtcctcaatgccgtcaacaaggaa
attcgccacatcgacaagcgccaggacaaggacctcaagccgcgaaaagagggcggtgcc
gtcgaagcccggcgcaacgcctccatgctcgacgtcgtccgaatggtccgccgaacgctc
gtcgaagacgatagcaccatcatgatcctgttccgggcgcgctatcagatgttccagttc
atcgacgagttcatcaccgaaggcgtccccttcacctcgctgaccgaccagcgaatgtgg
accgaccgactcacccagtacgtccgcgccgtcgaagcgctcgaggaaggtgaagacgtt
accggcctgcaggcacgacgcctcgccgacatgcttcaggagtccgcgttcggaacgaac
gaacgcgacggactcttcgacgaaatcgacgagcgccaggaagagaccggcatcgaggac
ctcgaggaactcatgattccggccgacgtaatcgaggagtacgccccgttcatgcccggc
ccagcctcggcgtctgacatggtccggaaagtgacgaacttccagaagaaaagcatcaaa
tcctacttcggaatcggcgagtacaccggcatggcgaccgaccgcgtccgcgtcggcacc
atccactccgcgaagggtcgtgaggctgaccacgtcatcatcggcaccgacctcaccgag
aaggtcgtcgagcagatggtcgcgaccgtcgacgaccccgaagccattcccggctgtgag
gagtttaccaaaacgacctcgcccgttcccgtcctcaccgacaacgaacgccgcgtcttc
tacgtcggaatgtcccgggctcgagaacgcctcgtcatactcgagaacctcgtcgacggc
gctccgacgctaccgatcgacgtcttgctccacaacgaactccgagaggagccactcgag
gagatcatcgaagcggctcaagagccccaggaagcagacgccaacagcgaggaactcgaa
gccgaagcaccgtga
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